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The map label for this gene is ybeX [C]

Identifier: 38233801

GI number: 38233801

Start: 1211988

End: 1213382

Strand: Reverse

Name: ybeX [C]

Synonym: DIP1211

Alternate gene names: 38233801

Gene position: 1213382-1211988 (Counterclockwise)

Preceding gene: 38233802

Following gene: 38233800

Centisome position: 48.76

GC content: 47.81

Gene sequence:

>1395_bases
ATGGACATTCTGTTAAGTATCCTCTCGCTCTTAGGTTTTGTGCTTCTCACCGCCAGCACAGGACTTTTCGTTGCCATTGA
GTTTGCGCTCACCAGTTTGGAGCGCTCAACCATTGAAACCGAAGTAAAGGAGCGTGGGGATAAAAAATCTCGGGCGGTAC
AACGCGATTATCAAAATCTCTCCTTCGTCTTGTCTGGTGCCCAATTAGGTATCACCATCACTACCCTTGCAACGGGTTAT
CTAGCAGAACCAGTTCTTGCAAAGTTTTTAACACCGCTTTTGGAATTGATGGGATTGGAAGCGTCGACAAGCGTAGCTGT
CGCTTTAGTGTTGGCGTTGATGATCGCAACGTTCTTGTCAATGGTGTTTGGCGAACTCCTGCCCAAAAACGTTGCAATCA
CAAACCCTATGGGTACCGCGCGCCACGTCGTCGGACCAGTTAATGCCTTCAATACCGTATTTAAGGGCTTTATCAAGTTT
TTAAATCACTCGGCTAACTGGGCAGTACGAAAAATGGGAATCGAGCCAGCCGATGAGCTCGCCACAGCTCGTTCCACTCA
AGAGCTCACGGCCATCGTCAAAAGTTCTGCGGAAACTGGCGATATTGATGAAAATACAGCTCTTGTTCTTGACCGCTCAC
TCAAATTTGGTGAGACAACTGCCGGTGAGTTGATGACTCCTCGGTCTACAGTTGAAGTTCTCTCAGCAGAAGACACCGTT
CTTGACCTCATCGCATTAGCAATAGAGACAGGACACTCACGCTTCCCAGTCATTCGTGGCGACCTAGACGATACGATCGG
CGTCGTCCATTTTAAAGATGCATTTTCTGTTCCTGAAGATCAGCGCCACGTAATTCCATTAAGTTCAATAGCACGCCCTG
TGCCCATTATCCCTGAAAGCCTAGATGGTGATGCCGTCCTCAATGCAGTGCGTTCTGCTGGATCCCAAATCATCCTCGTT
GCAGATGAATACGGTGGAACTTCAGGCCTTATCACAATCGAAGACGTCGTTGAAGAAATCCTCGGTGAGGTTTATGACGA
GCATGACGATGCAGACGCAGAACGTGATTTCAACAAATTTGGCAATAGTTGGGAAGTTTCCGGCCTAGCCCGTATCGATG
AAGTTGCCAAAACAATTGGATACGTCGCCCCAGACGGCCCCTATGAGACTCTCGGTGGATTAGTAATGCAAGTCCTAGGA
CGAATCCCTGAAACTAACGACGAACTACTACTACCTGAAAGTGACAATCCAGCATTAGCTGAATTCGAATCCGGTTACAG
TTGCCGCTGGCTCGCTAAAGTCTCCGCCATGGAAGATCGCAGAGTAGACAAGGTAATTATTTCACCGCTGCAAGATGATG
AAGTAGCCCAGTATGAAAAGGAACAGAATTCATGA

Upstream 100 bases:

>100_bases
GCAATCCAAAAATAAACGTCCCATCGCAACGTTTGGTGGGCACAAGAAGAAAGATGGTCAAAAGGGTCGAAGTTAATTCT
TTAACCCAGTATTTCTCACG

Downstream 100 bases:

>100_bases
GTCTCAGTAGCACCGTTTTACTGATTGTTCTTTTGCTCCTTGCCAATGCTTATTTCGTCGCATCCGAATTTGCACTTGTC
TCTTCGCGCAAAGATCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKERGDKKSRAVQRDYQNLSFVLSGAQLGITITTLATGY
LAEPVLAKFLTPLLELMGLEASTSVAVALVLALMIATFLSMVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKF
LNHSANWAVRKMGIEPADELATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAGELMTPRSTVEVLSAEDTV
LDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQRHVIPLSSIARPVPIIPESLDGDAVLNAVRSAGSQIILV
ADEYGGTSGLITIEDVVEEILGEVYDEHDDADAERDFNKFGNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVLG
RIPETNDELLLPESDNPALAEFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQYEKEQNS

Sequences:

>Translated_464_residues
MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKERGDKKSRAVQRDYQNLSFVLSGAQLGITITTLATGY
LAEPVLAKFLTPLLELMGLEASTSVAVALVLALMIATFLSMVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKF
LNHSANWAVRKMGIEPADELATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAGELMTPRSTVEVLSAEDTV
LDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQRHVIPLSSIARPVPIIPESLDGDAVLNAVRSAGSQIILV
ADEYGGTSGLITIEDVVEEILGEVYDEHDDADAERDFNKFGNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVLG
RIPETNDELLLPESDNPALAEFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQYEKEQNS
>Mature_464_residues
MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKERGDKKSRAVQRDYQNLSFVLSGAQLGITITTLATGY
LAEPVLAKFLTPLLELMGLEASTSVAVALVLALMIATFLSMVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKF
LNHSANWAVRKMGIEPADELATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAGELMTPRSTVEVLSAEDTV
LDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQRHVIPLSSIARPVPIIPESLDGDAVLNAVRSAGSQIILV
ADEYGGTSGLITIEDVVEEILGEVYDEHDDADAERDFNKFGNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVLG
RIPETNDELLLPESDNPALAEFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQYEKEQNS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=382, Percent_Identity=30.8900523560209, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI40068053, Length=263, Percent_Identity=23.9543726235741, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI40068055, Length=263, Percent_Identity=23.9543726235741, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI94681046, Length=318, Percent_Identity=23.5849056603774, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1786879, Length=220, Percent_Identity=33.1818181818182, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1790664, Length=407, Percent_Identity=23.0958230958231, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082033, Length=369, Percent_Identity=24.390243902439, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI145693175, Length=399, Percent_Identity=22.8070175438596, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788119, Length=310, Percent_Identity=25.4838709677419, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50201; Mature: 50201

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKERGDKKSRAVQRDYQNL
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SFVLSGAQLGITITTLATGYLAEPVLAKFLTPLLELMGLEASTSVAVALVLALMIATFLS
HHEEECCHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKFLNHSANWAVRKMGIEPADEL
HHHHHHCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHH
ATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAGELMTPRSTVEVLSAEDTV
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHH
LDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQRHVIPLSSIARPVPIIPES
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEHHHHCCCCCCCCCC
LDGDAVLNAVRSAGSQIILVADEYGGTSGLITIEDVVEEILGEVYDEHDDADAERDFNKF
CCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVLGRIPETNDELLLPESDNPALA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHH
EFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQYEKEQNS
HHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKERGDKKSRAVQRDYQNL
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SFVLSGAQLGITITTLATGYLAEPVLAKFLTPLLELMGLEASTSVAVALVLALMIATFLS
HHEEECCHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKFLNHSANWAVRKMGIEPADEL
HHHHHHCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHH
ATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAGELMTPRSTVEVLSAEDTV
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHH
LDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQRHVIPLSSIARPVPIIPES
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEHHHHCCCCCCCCCC
LDGDAVLNAVRSAGSQIILVADEYGGTSGLITIEDVVEEILGEVYDEHDDADAERDFNKF
CCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVLGRIPETNDELLLPESDNPALA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHH
EFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQYEKEQNS
HHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]