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The map label for this gene is ytfL [C]

Identifier: 38233800

GI number: 38233800

Start: 1210939

End: 1211991

Strand: Reverse

Name: ytfL [C]

Synonym: DIP1210

Alternate gene names: 38233800

Gene position: 1211991-1210939 (Counterclockwise)

Preceding gene: 38233801

Following gene: 38233799

Centisome position: 48.7

GC content: 47.58

Gene sequence:

>1053_bases
ATGAGTCTCAGTAGCACCGTTTTACTGATTGTTCTTTTGCTCCTTGCCAATGCTTATTTCGTCGCATCCGAATTTGCACT
TGTCTCTTCGCGCAAAGATCGAATTGAGAATCTGATAGCTCAAGGACAGCCACGGGCGCAAAAAGTCTTGCTGTCCATGG
AGCATCTTTCTATCATGCTTGCGGCATGCCAATTTGGTATTACGATATGTTCCCTAATTTTAGGCAAAGTTGCCGAACCA
GCTATTGCACATTTTATTGAGCAACCATTCCATTCCCTTGGATTACCTGCTCATCTGCTCCACCCGGTTTCATTCATCAT
CGCACTAGGTATCATTACTTTCCTTCATATTCTCGCCGGAGAAATGGTTCCGAAAAATATTGCACTTGCAGGGCCAGAAA
CTCTTGCACTTTGGCTGATTCCATCGCTGCTATGGTTCATGCGTTTGACAAGGCCCATCATTGCAGTAATGAACTGGCTA
GCTCGTATAAGTTTGCGCGCCGTCGGGATTGAACAAAAAGACGAACTTGATTCCGCCGTAGACCCAGACCAGCTAGTGAC
CATGCTCTCCGAGTCTCGATCAGAGGGCTACCTCGACGCAGAAGAACATGCACGGTTGAATAAAGCACTCCGAGTTGAAG
ATAGGTCTCTTCAAGAGGTCATGATTCCTCTCAACAAAGTGCGTTCCCTCAACTTTGGAATGCGGGGACCACTTCTCCAA
GAATTAGAAACTGCTGTTGCAGAAACTGGGTTTTCACGTTTTCCAGTGACAGGAAAAGACGGCTCGTATCTCGGTTATGT
GCACATCAAGGACGTACTGGATCGTTTTGATCATTCCAGTCCTGACACCATCATTCATCGCTCAGAGATCCGGCCATTAA
TCATCGTTGATGCAGCTGGAACTATGGATGAGGCCTTGCAATCGATGCACTCCAAGTCAGCGCACATGGCCCAAGTTCGT
GATCGCGGCCTCCTCCTAGGCGTTATCACCCTAGAGGATCTCATCGAGGAATACGTTGGAACCTTCTCCGACTGGACACA
CGAACAATCATGA

Upstream 100 bases:

>100_bases
TCGCTAAAGTCTCCGCCATGGAAGATCGCAGAGTAGACAAGGTAATTATTTCACCGCTGCAAGATGATGAAGTAGCCCAG
TATGAAAAGGAACAGAATTC

Downstream 100 bases:

>100_bases
GAAATTTTGATCTAATTCGTCTCACTGAAGCTCAATGGCATGACCGTGAATCTGCTCACCAACTTCGGGCAGATCGGCTT
ACAGCTGACCACATGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPRAQKVLLSMEHLSIMLAACQFGITICSLILGKVAEP
AIAHFIEQPFHSLGLPAHLLHPVSFIIALGIITFLHILAGEMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWL
ARISLRAVGIEQKDELDSAVDPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMIPLNKVRSLNFGMRGPLLQ
ELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSPDTIIHRSEIRPLIIVDAAGTMDEALQSMHSKSAHMAQVR
DRGLLLGVITLEDLIEEYVGTFSDWTHEQS

Sequences:

>Translated_350_residues
MSLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPRAQKVLLSMEHLSIMLAACQFGITICSLILGKVAEP
AIAHFIEQPFHSLGLPAHLLHPVSFIIALGIITFLHILAGEMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWL
ARISLRAVGIEQKDELDSAVDPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMIPLNKVRSLNFGMRGPLLQ
ELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSPDTIIHRSEIRPLIIVDAAGTMDEALQSMHSKSAHMAQVR
DRGLLLGVITLEDLIEEYVGTFSDWTHEQS
>Mature_349_residues
SLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPRAQKVLLSMEHLSIMLAACQFGITICSLILGKVAEPA
IAHFIEQPFHSLGLPAHLLHPVSFIIALGIITFLHILAGEMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWLA
RISLRAVGIEQKDELDSAVDPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMIPLNKVRSLNFGMRGPLLQE
LETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSPDTIIHRSEIRPLIIVDAAGTMDEALQSMHSKSAHMAQVRD
RGLLLGVITLEDLIEEYVGTFSDWTHEQS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=328, Percent_Identity=30.4878048780488, Blast_Score=165, Evalue=5e-41,
Organism=Escherichia coli, GI1790664, Length=343, Percent_Identity=27.6967930029155, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 38828; Mature: 38697

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPRAQKVLLSMEHLSIML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AACQFGITICSLILGKVAEPAIAHFIEQPFHSLGLPAHLLHPVSFIIALGIITFLHILAG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWLARISLRAVGIEQKDELDSAV
HHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
DPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMIPLNKVRSLNFGMRGPLLQ
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
ELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSPDTIIHRSEIRPLIIVDAAG
HHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
TMDEALQSMHSKSAHMAQVRDRGLLLGVITLEDLIEEYVGTFSDWTHEQS
CHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPRAQKVLLSMEHLSIML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AACQFGITICSLILGKVAEPAIAHFIEQPFHSLGLPAHLLHPVSFIIALGIITFLHILAG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWLARISLRAVGIEQKDELDSAV
HHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
DPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMIPLNKVRSLNFGMRGPLLQ
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
ELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSPDTIIHRSEIRPLIIVDAAG
HHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
TMDEALQSMHSKSAHMAQVRDRGLLLGVITLEDLIEEYVGTFSDWTHEQS
CHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]