Definition Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence.
Accession NC_002774
Length 25,107

Click here to switch to the map view.

The map label for this gene is repA

Identifier: 14141824

GI number: 14141824

Start: 315

End: 1250

Strand: Direct

Name: repA

Synonym: SAVP001

Alternate gene names: NA

Gene position: 315-1250 (Clockwise)

Preceding gene: NA

Following gene: 14141826

Centisome position: 1.25

GC content: 25.75

Gene sequence:

>936_bases
ATGCCCAATTTTGAAAAATATAATTTATCACAAGTAAAAACTGAAAGATTTTATCAACTGCCTAAATATTTATTTGAAGA
TGCATATTTTAAGAAAATGTCTGCAGAAGCCAAAATTATGTATGCGTTATTAAAAGATCGTTTTGAATTATCCCTCCAAA
ATGAATGGGTAGATAAAAATAATAATATTTACTTTATTTTCAGTAATAAACATTTGTGTGAATACTTAGGTTATGCAGAA
CAAAAAATTATAAAATTAAAAAAAGAGTTAATAAAATTTAATTTACTAACTCAAGAACGTGTTGGCCTTAATAAACCAAA
TAGATTATACCTATTAAAACCTAATTATGACATTGAAGCCAGTCATATCAAGGAACTTCCAAATTCACAGTTCCAGAACA
ATGAATTTGGAAGTTCTAGAACTGTGAATTTAAGTGGTCAAGAACTTCCAAATTCACAGTCTAATGATACTGATTATAAT
GACACTGATTATATTAAGACTAATTATAATGATATGTATGATTTGAATGATAGGAAATTAACATATTCTAGTAATCATAC
AAATCATTCAAATCACTACTATTCAAAATTCAATGATGAAGCTTTAAAATTTCAATTACTTGAAGAACTACCACAAAGTA
TTCAAAGTTATTTAAGTAACTTTTCTGTATCTGAAATTAAACTTATTAAATCTGTGTTATTAAAAGCCAAAACATCCTTC
AACAATTCTATTGATGCATATTATTTATTAGAAGATATGGAATTTGAAATTGTTAATGTTCTTAAGCGTTTTAAAGCTAC
ATTAATTCAAAAAAATGAAACCGTTGAAGCAATGCAAGGGTACTTAATGAAATCTCTTAAATCTGAATTTGCAGAAGTAC
ATACGCTTAATAAACGACGTGATCATTTACCAATCACTTCTTTATTTAATCAATAA

Upstream 100 bases:

>100_bases
ATTATATATATCTAATCATCTAAGTGCAAGCACAAAACATATAACTTACGTAAAAATTGTTTTATTACCTCAATCCCAAA
ATGGAAATGAGGTTTTTATT

Downstream 100 bases:

>100_bases
TACAACTTAATAAGCCAACAATGATCCAATTAGAGAATATCTTTAATTAGATGTTCTCTTAACTGTAAGCGAACTTTATT
TTCAATGAAATGTAATTAAT

Product: replication initiator protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKNNNIYFIFSNKHLCEYLGYAE
QKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEASHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYN
DTDYIKTNYNDMYDLNDRKLTYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDHLPITSLFNQ

Sequences:

>Translated_311_residues
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKNNNIYFIFSNKHLCEYLGYAE
QKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEASHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYN
DTDYIKTNYNDMYDLNDRKLTYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDHLPITSLFNQ
>Mature_310_residues
PNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKNNNIYFIFSNKHLCEYLGYAEQ
KIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEASHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYND
TDYIKTNYNDMYDLNDRKLTYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSFN
NSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRRDHLPITSLFNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010724 [H]

Pfam domain/function: PF06970 RepA_N [H]

EC number: NA

Molecular weight: Translated: 36877; Mature: 36746

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEA
CCEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH
SHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYNDTDYIKTNYNDMYDLNDRKL
HHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCEE
TYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
EECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRR
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DHLPITSLFNQ
CCCCHHHHHCC
>Mature Secondary Structure 
PNFEKYNLSQVKTERFYQLPKYLFEDAYFKKMSAEAKIMYALLKDRFELSLQNEWVDKN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NNIYFIFSNKHLCEYLGYAEQKIIKLKKELIKFNLLTQERVGLNKPNRLYLLKPNYDIEA
CCEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH
SHIKELPNSQFQNNEFGSSRTVNLSGQELPNSQSNDTDYNDTDYIKTNYNDMYDLNDRKL
HHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCEE
TYSSNHTNHSNHYYSKFNDEALKFQLLEELPQSIQSYLSNFSVSEIKLIKSVLLKAKTSF
EECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
NNSIDAYYLLEDMEFEIVNVLKRFKATLIQKNETVEAMQGYLMKSLKSEFAEVHTLNKRR
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DHLPITSLFNQ
CCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2764571 [H]