Click here to switch to the map view.

The map label for this gene is traA [H]

Identifier: 14141826

GI number: 14141826

Start: 2209

End: 4131

Strand: Direct

Name: traA [H]

Synonym: SAVP003

Alternate gene names: 14141826

Gene position: 2209-4131 (Clockwise)

Preceding gene: 14141824

Following gene: 14141827

Centisome position: 8.8

GC content: 29.49

Gene sequence:

>1923_bases
ATGAATAAAGGTTACTTTATGTTGAGAGTGACTAACATTAATCGAGCAACAAAAAATATCGTTGCGTCAGCGTCTTATCG
TTCTGATGAAGCATTATATAGCGAACGTACAGATGAAAAAATTAAGTTTAGAAATCATACTATTAAGCCTGAAAGCATGA
TTTTAACTCCTCAACATGCACCCGAATGGACTAAAGATAGACAGCGTTTATGGAATGAAGTTGATAAAGTTGAAAAGAAT
AATGCGAAAACAAAAAATCCTAGATTAGCAAAAGAAGTCTTATTAAGTTTGCCTAATGATTTTGATAGAGAGGTACAAAC
TGAATTAACTAAAGATTTTATAAAAAGTGAGTTTGTAGACAAAGGAATGGTTGCTGATATTTCAATTCATAGAGATGATA
TAAACAACCCACACGCCCATGTTCTACTTACTCAAAGACCGTTTAATGCAGACGGTACTTGGGGGAAAAAGACAAAAACG
AGAACGCAATATGATGAAAATGGCAATGCGATTTTAAATAAAAATGGTAATAAAGTTAGAAAACAAGAACGATTTGCCGA
CTTTGATTTCAAAGAAGTTCGTAAGCATTGGGAATTAAAATTAAATCAATACTCAGAACGTGAACAAAGTTTAAGACGAT
ATGATAGTCGTTCTTTTGAAGCGCAAGGTTTAGAAAAAATTGCCGAAATTCCACTTACAAGAGAAGAATATAGATTAGAA
CAAAATGAAAGAAAACGCTGTGAAAAAGAGGGTATCGAGTACCAACCCGTTACTTATTACGGACAGAAAAATGAACAAAT
TAGAAGATATAATCGTGGCGAAGTATCACAATTATTTAGTGATAAAGAGAAAGAACAAGCACAAAATGAAATTAGATTAT
TTATTCAAAATGCTAACGAACAAGTAAGTAAAAATGAACAAAGTTATTCTATTTTATTTGATAGATATCAACGTGATGTT
GGCTATTCAGAGGCGAAAGAAACAATTAAAAATACGTTTGACAGTGCGTCTACCTTTGGTCGTAAAATTCAAAATGATTT
ACTTAAAAATGAAATTAAGAGACGTCAATTAAAATTCTATGCTAAAAATTATGATGAAAATTATCAGTTTAGAAAAGAAA
TTGAAAGTAAAGGATATAGTCAACAAGAGTTTGTTAATACTGTTGAAACTAACTATAAAGCGTTACTCAATGAGAAGAAT
AAATTAGAAAGTAGAGAGGAAAAACGTAAAGAGATTTATCAATCAGCTAAAGATGTTTATCTAACTGAAAGTGAAAAAAA
TCATCTCATTGTTCAGCAAATGTACCCTAAATCTCATCATCATTTTAGCCATGATGAAAAAGCATTTATTGTTGATGAGG
CACAAAAAGGTAATATTATAAAAGCAACTCATGTTCAATACCTGTTCAAACAAAATAACAATATTCCTAATGATGTATTG
CTAGAAGATACTTATAAAAAAGCGAGTAAAGATATTTTCTTTAGTCAAAAACATCTTAAAAATTTAGAAAAAGATAGCTT
TGAATATAACGTTGAGTTGCAATTTATTAAGGAAAAAGAAAAAGAAATTGATAGTTATAAAGAACATATTGATGATGATT
TAAGAATAGATATAGGCGATAAAAACTTTGAAAAAGTCAAAGACCAAACACCTAATGAAAAAGTTCAATTACTCATTAAA
CTTGAGAAATATAATCATGTCGATCAAGAAGAAGTTATCGAAAAACATATTAATCAAGTAGATAGAAATGATCATGACAA
TCGTATTGAACATGAAAATGAACAAACTAATCACATTAATTTACCAACGATAAATGCTAGTGACTTTCTTATGTACTATG
CGAACGAAACTGAAAAGCAAAACAATATTAATCATCAGAAAAAGAAGAAGAAACAAGAGAGAAATAACCAAATGAGAAGA
TAG

Upstream 100 bases:

>100_bases
ACATGCAAATTGAAAATTGGCATAAAAATGGGCAACCATACTGGTTGATCATTATAGTTCCCACAGGGGTAAAAAAACAG
AAAAGAGAGGAGGTAAAATC

Downstream 100 bases:

>100_bases
TAAGCAGTTGAAATCATACAAAGTTCATTCTTTAATAATAAGAAACTTAACCCAATGTGGTAAATTAGCTTTGGTTTAAA
GAAAACATTTATATACTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN
NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT
RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE
QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV
GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN
KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL
LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK
LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR

Sequences:

>Translated_640_residues
MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN
NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT
RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE
QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV
GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN
KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL
LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK
LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
>Mature_640_residues
MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN
NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT
RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE
QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV
GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN
KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL
LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK
LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 76718; Mature: 76718

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHA
CCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEECCCCC
PEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVD
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
KGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVR
CCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
KQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANE
HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH
QVSKNEQSYSILFDRYQRDVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFY
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVY
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEE
LTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL
EECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCC
LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGD
HHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECC
KNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHIN
CHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
CCEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHA
CCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEECCCCC
PEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVD
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
KGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVR
CCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
KQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANE
HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH
QVSKNEQSYSILFDRYQRDVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFY
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVY
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEE
LTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL
EECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCC
LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGD
HHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECC
KNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHIN
CHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
CCEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]