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The map label for this gene is ytpA [H]

Identifier: 15924755

GI number: 15924755

Start: 1900576

End: 1901403

Strand: Reverse

Name: ytpA [H]

Synonym: SAV1765

Alternate gene names: 15924755

Gene position: 1901403-1900576 (Counterclockwise)

Preceding gene: 57634639

Following gene: 15924754

Centisome position: 66.05

GC content: 32.37

Gene sequence:

>828_bases
ATGTGGAAGTGGGAAGCTGAAAATGATGCGAAAGGCGTCGTTGTTATTGCTCATAATATATTAGAACATACGGGAAGATA
TGCATATGTTATTACGATGTTAAGAAGAAATGGCTATCATGTGATTATGGGAGATTTGCCTGGTCAAGGTCAAACTTCAA
GAGCTAATAAAGGACAAATTGAAAACTTTCAAACGTATCACGAAAGTTTGCTAGATTGGTTAAAGATAGCTAATGAATAT
AAAATTCCTACTTATGTATTAGGGGTAGGACTTGGCGGTTTGATTTTATTAAATTTACTTGAAAAAGTAGAATTGCCAAT
CGAGGGGATGATGTTAATTTCTCCTATGCTAGAACTTCAAAAGAATGGAAAAAATCGTAAAGATAAACTTGTTTCAAATA
TAGGTAAAATTTCAAAAGACACACGTTTTAATGTTGGTGTAGAACCAAAAGATTTAACACGTAATTTAGAAATTGTTGAA
GAAACAGTTAACGATGGTTTAATGTTAAAAAAAGCAACGTATCATTGGTATAATACAATTAATGAGACGATGAAAGATAC
GATGGCTCATATTCATGACATTCAACCAATGCCAACGCTATTAATGTATGGAACGAAGGATTTAATTGTTGATACTAGGG
CAATTGATGAGTTTAAAGAAAAATATCAAACACCTGAATTATATTTTAAAGCTTGGCAAGGTTTTTACCACGAGGTTCAC
AATGAGCCAGAACGTGATGAAGTAATGCGTTATATTCTGACTTTCTTAAATAACAGCGTCAATACAATGGGCTTTATTGT
TGAAGATGACGAAATTGTAGAAATTTAA

Upstream 100 bases:

>100_bases
ATAATAATATGGACAACAATAATACTATAAATAGAAATCTACATAGTGAATTTGCTATAATTATGTTATTGAAGATTAAT
GAAAAAGGGGCAGTATAATA

Downstream 100 bases:

>100_bases
TATTCTAAAAAGATGAGACAGTAGATGCTCATCTTTTTTTACTTTTTTAAGGTTGAGAATGTATATCACATTTTATACAC
ATTTGATTTGTAAGAAATGT

Product: lysophospholipase-like protein

Products: NA

Alternate protein names: Bacilysocin biosynthesis protein ytpA [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANKGQIENFQTYHESLLDWLKIANEY
KIPTYVLGVGLGGLILLNLLEKVELPIEGMMLISPMLELQKNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVE
ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEFKEKYQTPELYFKAWQGFYHEVH
NEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI

Sequences:

>Translated_275_residues
MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANKGQIENFQTYHESLLDWLKIANEY
KIPTYVLGVGLGGLILLNLLEKVELPIEGMMLISPMLELQKNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVE
ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEFKEKYQTPELYFKAWQGFYHEVH
NEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI
>Mature_275_residues
MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANKGQIENFQTYHESLLDWLKIANEY
KIPTYVLGVGLGGLILLNLLEKVELPIEGMMLISPMLELQKNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVE
ETVNDGLMLKKATYHWYNTINETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEFKEKYQTPELYFKAWQGFYHEVH
NEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI

Specific function: Phospholipase involved in the biosynthesis of the antibiotic bacilysocin. It probably catalyzes the hydrolysis of the 2-sn-acyl moiety of phosphatidylglycerol to produce bacilysocin (lysophosphatidylglycerol). Is also able to catalyze the hydrolysis react

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR022742 [H]

Pfam domain/function: PF12146 Hydrolase_4 [H]

EC number: NA

Molecular weight: Translated: 31866; Mature: 31866

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANKGQI
CCCCCCCCCCCCEEEEEHHHHHHCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCCCCH
ENFQTYHESLLDWLKIANEYKIPTYVLGVGLGGLILLNLLEKVELPIEGMMLISPMLELQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVEETVNDGLMLKKATYHWYNTI
HCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
NETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEFKEKYQTPELYFKAWQGFYHEVH
HHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEECC
>Mature Secondary Structure
MWKWEAENDAKGVVVIAHNILEHTGRYAYVITMLRRNGYHVIMGDLPGQGQTSRANKGQI
CCCCCCCCCCCCEEEEEHHHHHHCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCCCCH
ENFQTYHESLLDWLKIANEYKIPTYVLGVGLGGLILLNLLEKVELPIEGMMLISPMLELQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KNGKNRKDKLVSNIGKISKDTRFNVGVEPKDLTRNLEIVEETVNDGLMLKKATYHWYNTI
HCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
NETMKDTMAHIHDIQPMPTLLMYGTKDLIVDTRAIDEFKEKYQTPELYFKAWQGFYHEVH
HHHHHHHHHHHHCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NEPERDEVMRYILTFLNNSVNTMGFIVEDDEIVEI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]