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The map label for this gene is 15898860

Identifier: 15898860

GI number: 15898860

Start: 1890522

End: 1891193

Strand: Reverse

Name: 15898860

Synonym: SSO2073

Alternate gene names: NA

Gene position: 1891193-1890522 (Counterclockwise)

Preceding gene: 15898862

Following gene: 15898859

Centisome position: 63.2

GC content: 33.48

Gene sequence:

>672_bases
ATGAATAGTGAATTAGAAATCAATTTGAGAAAGTTAGGGTTTTCAGTGTATGAGGCCAAAGTTTATCTAACGTTATTGAA
CCTTTGCAACTCCACGATGAAGGAGCTTTCAGAAAATGCTGAAATACCTTATCAAAAAGTTTATGAAGTGGTGAAGTCGT
TAGAGGATAAGGGTTTAGTGAGGGTAATTGAAGGAAGACCAAAAAAGGTCAAACTAATAGATCCGTCGATATCTTTAAAG
GTATATAGGGATAAAATTGTTAGTGAATTAGACTATGCGATAGGTAATGTTATTTCTTATTGGAGTGAAAAGGGAAAAGG
AGAAGCTGACCGTAGTTTGCACATTAAGGGTAAAACGATTGTCATGAGAATGATAAGGGAATTGGTGGATAAAAGTAACA
AGATTAAGGTGGTCTGGGATATCCTGCCTGAGTGGTTGATTAAGATTCTTAAAAAGTATAAGGGTAATTTAACTGTGATA
ACTTCTTCCAATAATTTAAGCTTGAATGCTGAGGTTAAATATGTTAAGAATATCAAATCGAAATTTATAATATTTGACGA
TTCAGTATTGGTTACTTTCAATGATCAAGATGAGATTGTTGTGGACTCTTGTAGAGGATGTGTACTTCAAGCAGAAGAGC
ACTTTGATCTATTAACTTATAAGAGTGAATAA

Upstream 100 bases:

>100_bases
TAGATATAATCCTGTAAAAAAGACTAATATTGTAAACAAAATAAACTGTCTATTCATCATAAGTACTAAGATTTAAAAGT
GATAAAAACGATTATTCACT

Downstream 100 bases:

>100_bases
CTCTTATATCTAATTACTTATTTAAAGTAAATTGATGATATTCAGGCAGATTATAAGCAAAAGTGGCGGTTGCGCTACTT
ACGTTTTCGGTTGCACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Sugar-Specific Transcriptional Regulator TrmB

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNSELEINLRKLGFSVYEAKVYLTLLNLCNSTMKELSENAEIPYQKVYEVVKSLEDKGLVRVIEGRPKKVKLIDPSISLK
VYRDKIVSELDYAIGNVISYWSEKGKGEADRSLHIKGKTIVMRMIRELVDKSNKIKVVWDILPEWLIKILKKYKGNLTVI
TSSNNLSLNAEVKYVKNIKSKFIIFDDSVLVTFNDQDEIVVDSCRGCVLQAEEHFDLLTYKSE

Sequences:

>Translated_223_residues
MNSELEINLRKLGFSVYEAKVYLTLLNLCNSTMKELSENAEIPYQKVYEVVKSLEDKGLVRVIEGRPKKVKLIDPSISLK
VYRDKIVSELDYAIGNVISYWSEKGKGEADRSLHIKGKTIVMRMIRELVDKSNKIKVVWDILPEWLIKILKKYKGNLTVI
TSSNNLSLNAEVKYVKNIKSKFIIFDDSVLVTFNDQDEIVVDSCRGCVLQAEEHFDLLTYKSE
>Mature_223_residues
MNSELEINLRKLGFSVYEAKVYLTLLNLCNSTMKELSENAEIPYQKVYEVVKSLEDKGLVRVIEGRPKKVKLIDPSISLK
VYRDKIVSELDYAIGNVISYWSEKGKGEADRSLHIKGKTIVMRMIRELVDKSNKIKVVWDILPEWLIKILKKYKGNLTVI
TSSNNLSLNAEVKYVKNIKSKFIIFDDSVLVTFNDQDEIVVDSCRGCVLQAEEHFDLLTYKSE

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25643; Mature: 25643

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSELEINLRKLGFSVYEAKVYLTLLNLCNSTMKELSENAEIPYQKVYEVVKSLEDKGLV
CCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE
RVIEGRPKKVKLIDPSISLKVYRDKIVSELDYAIGNVISYWSEKGKGEADRSLHIKGKTI
EEECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHH
VMRMIRELVDKSNKIKVVWDILPEWLIKILKKYKGNLTVITSSNNLSLNAEVKYVKNIKS
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHCCCC
KFIIFDDSVLVTFNDQDEIVVDSCRGCVLQAEEHFDLLTYKSE
EEEEEECCEEEEECCCCCEEEECCCCCEEECCCCEEEEEECCC
>Mature Secondary Structure
MNSELEINLRKLGFSVYEAKVYLTLLNLCNSTMKELSENAEIPYQKVYEVVKSLEDKGLV
CCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE
RVIEGRPKKVKLIDPSISLKVYRDKIVSELDYAIGNVISYWSEKGKGEADRSLHIKGKTI
EEECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHH
VMRMIRELVDKSNKIKVVWDILPEWLIKILKKYKGNLTVITSSNNLSLNAEVKYVKNIKS
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHHCCCC
KFIIFDDSVLVTFNDQDEIVVDSCRGCVLQAEEHFDLLTYKSE
EEEEEECCEEEEECCCCCEEEECCCCCEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA