Click here to switch to the map view.

The map label for this gene is 15898807

Identifier: 15898807

GI number: 15898807

Start: 1830357

End: 1831514

Strand: Reverse

Name: 15898807

Synonym: SSO2015

Alternate gene names: NA

Gene position: 1831514-1830357 (Counterclockwise)

Preceding gene: 15898808

Following gene: 15898798

Centisome position: 61.21

GC content: 34.89

Gene sequence:

>1158_bases
ATGAAGCTGGTAGTTGCTACAAATTTCGATGATTCCCTATTGGAAGAATTAAAAAAGTATCCAGAGGTTAAATACATTTT
TGGAAGTTTTAAGAGGACAATAACTGGACACGGTAGGGCTGGTTTTATCATACCCGATATTAAGGAAGAACAGTTCAAGA
ATCACATTAGTATAGCACATTCTTATGGCATAAAATTTCTTTACACAATGAATACTAACACATTATTAGGCAAGGAATAT
GACGCAGAATTTATTGGTAAAGTAATGAAAGAGATCGACAAGTTAGTAAGTCTAGGAGTTGATGGTTTCATAATAGCAGT
ACCCTTTCTTATTAGGCTAATAAGAAGTGAATACCCTGACTTAGAAGTATCAGCCTCATCGTTTTCTAGAATTCACAATG
TGAGGGAAGTTGAGGAGTATGCGAATTTAGGTGTAAACACTATTATTATGCATGAGGATGCAAATAGGGATTTCAAATTA
TTAAAGGAGATTGCTTCATTATCTAAAACTAATAAATTCGACGTGGAGTTAATACTCAACAATTCTTGTCTTTACGGTTG
CCCGTTTAGGCTTACACATGACGGAATTTCATCAATTACTTCTATGGTAAACGGAGTAAATGACGTTTGGTTTGAGTATC
CTATATTATTATGTGCAACTGATGTCTTAAACGATCCAGTAAATTTGATAAGGAGTAGGTGGATTAGGCCAGAGGATATA
AAATACTACGAGGAGATAGGGATAAATAGGTTTAAGATCGCTGGGAGAAATAAAAAGACAGAATGGATATTGAACGTGGT
TAAGGCTTTTACCGAGAGAATGTATGAAGGAGATCTCTTAGATCTTGTTAGCTACCCTCAAGGGAGAGCGGCAACAAAGG
CTATTCAGATGGTTAATGGGCCATCATCCTATTCTGTACTAACTAAAGTGAAGATAGACAATACAAAGTTCCCTGAGGAT
GGGATAAAGTTCTTCCTTACCAACGATTGCGATACGAGAAGTTGCAAGGAATGTAAATATTGTGATATCATAGCTGAAAG
AGTAATTACAATAGATGGAGAACCATTTAAGACTGACAAATGGAATATAAGGCAATCCTATCCTATCAATTTAATACCGA
AATTTAAAGAAAATGGTATAAAAAAAGGAAATCAATAA

Upstream 100 bases:

>100_bases
GAAGTTCCTAAATAACTTTTTCCTAATAAACCCCGTTAAACTATTTCCCACATGTTTTTCCTTAGCCAATCTTATTTAAA
TGGAAAAAGTCTGATATCAT

Downstream 100 bases:

>100_bases
TTACTTACTCCTAATTATTTCATTCTTTTAATTAATATCCTTGTTACTCCTCCTTGTTGTTGTATGTCAACTACTTGGTT
TCCGGTTCTCCTAGCCCACG

Product: protease, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKLVVATNFDDSLLEELKKYPEVKYIFGSFKRTITGHGRAGFIIPDIKEEQFKNHISIAHSYGIKFLYTMNTNTLLGKEY
DAEFIGKVMKEIDKLVSLGVDGFIIAVPFLIRLIRSEYPDLEVSASSFSRIHNVREVEEYANLGVNTIIMHEDANRDFKL
LKEIASLSKTNKFDVELILNNSCLYGCPFRLTHDGISSITSMVNGVNDVWFEYPILLCATDVLNDPVNLIRSRWIRPEDI
KYYEEIGINRFKIAGRNKKTEWILNVVKAFTERMYEGDLLDLVSYPQGRAATKAIQMVNGPSSYSVLTKVKIDNTKFPED
GIKFFLTNDCDTRSCKECKYCDIIAERVITIDGEPFKTDKWNIRQSYPINLIPKFKENGIKKGNQ

Sequences:

>Translated_385_residues
MKLVVATNFDDSLLEELKKYPEVKYIFGSFKRTITGHGRAGFIIPDIKEEQFKNHISIAHSYGIKFLYTMNTNTLLGKEY
DAEFIGKVMKEIDKLVSLGVDGFIIAVPFLIRLIRSEYPDLEVSASSFSRIHNVREVEEYANLGVNTIIMHEDANRDFKL
LKEIASLSKTNKFDVELILNNSCLYGCPFRLTHDGISSITSMVNGVNDVWFEYPILLCATDVLNDPVNLIRSRWIRPEDI
KYYEEIGINRFKIAGRNKKTEWILNVVKAFTERMYEGDLLDLVSYPQGRAATKAIQMVNGPSSYSVLTKVKIDNTKFPED
GIKFFLTNDCDTRSCKECKYCDIIAERVITIDGEPFKTDKWNIRQSYPINLIPKFKENGIKKGNQ
>Mature_385_residues
MKLVVATNFDDSLLEELKKYPEVKYIFGSFKRTITGHGRAGFIIPDIKEEQFKNHISIAHSYGIKFLYTMNTNTLLGKEY
DAEFIGKVMKEIDKLVSLGVDGFIIAVPFLIRLIRSEYPDLEVSASSFSRIHNVREVEEYANLGVNTIIMHEDANRDFKL
LKEIASLSKTNKFDVELILNNSCLYGCPFRLTHDGISSITSMVNGVNDVWFEYPILLCATDVLNDPVNLIRSRWIRPEDI
KYYEEIGINRFKIAGRNKKTEWILNVVKAFTERMYEGDLLDLVSYPQGRAATKAIQMVNGPSSYSVLTKVKIDNTKFPED
GIKFFLTNDCDTRSCKECKYCDIIAERVITIDGEPFKTDKWNIRQSYPINLIPKFKENGIKKGNQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 44158; Mature: 44158

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVVATNFDDSLLEELKKYPEVKYIFGSFKRTITGHGRAGFIIPDIKEEQFKNHISIAH
CEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHEECCCCCCEECCCCCHHHHHHHHHHEE
SYGIKFLYTMNTNTLLGKEYDAEFIGKVMKEIDKLVSLGVDGFIIAVPFLIRLIRSEYPD
ECCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
LEVSASSFSRIHNVREVEEYANLGVNTIIMHEDANRDFKLLKEIASLSKTNKFDVELILN
CEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
NSCLYGCPFRLTHDGISSITSMVNGVNDVWFEYPILLCATDVLNDPVNLIRSRWIRPEDI
CCEEECCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHH
KYYEEIGINRFKIAGRNKKTEWILNVVKAFTERMYEGDLLDLVSYPQGRAATKAIQMVNG
HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCC
PSSYSVLTKVKIDNTKFPEDGIKFFLTNDCDTRSCKECKYCDIIAERVITIDGEPFKTDK
CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCC
WNIRQSYPINLIPKFKENGIKKGNQ
CCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKLVVATNFDDSLLEELKKYPEVKYIFGSFKRTITGHGRAGFIIPDIKEEQFKNHISIAH
CEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHEECCCCCCEECCCCCHHHHHHHHHHEE
SYGIKFLYTMNTNTLLGKEYDAEFIGKVMKEIDKLVSLGVDGFIIAVPFLIRLIRSEYPD
ECCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
LEVSASSFSRIHNVREVEEYANLGVNTIIMHEDANRDFKLLKEIASLSKTNKFDVELILN
CEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
NSCLYGCPFRLTHDGISSITSMVNGVNDVWFEYPILLCATDVLNDPVNLIRSRWIRPEDI
CCEEECCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHH
KYYEEIGINRFKIAGRNKKTEWILNVVKAFTERMYEGDLLDLVSYPQGRAATKAIQMVNG
HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCC
PSSYSVLTKVKIDNTKFPEDGIKFFLTNDCDTRSCKECKYCDIIAERVITIDGEPFKTDK
CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCC
WNIRQSYPINLIPKFKENGIKKGNQ
CCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]