Click here to switch to the map view.

The map label for this gene is 15898771

Identifier: 15898771

GI number: 15898771

Start: 1787734

End: 1788111

Strand: Reverse

Name: 15898771

Synonym: SSO1975

Alternate gene names: NA

Gene position: 1788111-1787734 (Counterclockwise)

Preceding gene: 15898772

Following gene: 15898770

Centisome position: 59.76

GC content: 28.84

Gene sequence:

>378_bases
ATGAAAGTATTAATAGAAAGCTCAGCAATTATTGAATATTTGAAAGGTAATGCAAAGGTAAAGGAAATTATTTCCAATTC
TGAAGATTTTTATGTTAGTACATTAACAATTTTTGAAGTATTACTCGGCAAAGTTGAGGAAAATAAAATCCTCGACTTTT
TGTCAGCATTTAATGTAATAGGTCTTAATAAAAAAGATTCCATTATTGCTTCAAGGATATACAAGAGATTAAGAGATAAG
GGAAAGTTGATAGGATATTTCGATATATTAATATCCGCCCAAGCTATCAATAGAGATTTAACTCTAGTGACTAAGGATAC
TGATTTTTTAAAAGTAGCTGACGAATTTAATGAACTGAAAGTCGCTCTAATTACTTAG

Upstream 100 bases:

>100_bases
ACCTTGAGGAGGAGGAAATTGGAGAAGTATTTCGGAATTCTTAATGAAGAGGAAGCAGAAGAGATTATGAAAGAAATCAA
AGAAGTGAGGAAGATAACTG

Downstream 100 bases:

>100_bases
GATTTATTATACCGTCTTTAGGCTTCAGTTAGCAAAATACTTTAAAGAGGGAAATATTTTATAAATTTTCTATTTAGACT
TCTTTTTCTATCATAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKVLIESSAIIEYLKGNAKVKEIISNSEDFYVSTLTIFEVLLGKVEENKILDFLSAFNVIGLNKKDSIIASRIYKRLRDK
GKLIGYFDILISAQAINRDLTLVTKDTDFLKVADEFNELKVALIT

Sequences:

>Translated_125_residues
MKVLIESSAIIEYLKGNAKVKEIISNSEDFYVSTLTIFEVLLGKVEENKILDFLSAFNVIGLNKKDSIIASRIYKRLRDK
GKLIGYFDILISAQAINRDLTLVTKDTDFLKVADEFNELKVALIT
>Mature_125_residues
MKVLIESSAIIEYLKGNAKVKEIISNSEDFYVSTLTIFEVLLGKVEENKILDFLSAFNVIGLNKKDSIIASRIYKRLRDK
GKLIGYFDILISAQAINRDLTLVTKDTDFLKVADEFNELKVALIT

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14134; Mature: 14134

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLIESSAIIEYLKGNAKVKEIISNSEDFYVSTLTIFEVLLGKVEENKILDFLSAFNVI
CEEEECHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GLNKKDSIIASRIYKRLRDKGKLIGYFDILISAQAINRDLTLVTKDTDFLKVADEFNELK
CCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEE
VALIT
EEEEC
>Mature Secondary Structure
MKVLIESSAIIEYLKGNAKVKEIISNSEDFYVSTLTIFEVLLGKVEENKILDFLSAFNVI
CEEEECHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GLNKKDSIIASRIYKRLRDKGKLIGYFDILISAQAINRDLTLVTKDTDFLKVADEFNELK
CCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEE
VALIT
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA