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The map label for this gene is ydcM [C]

Identifier: 15898770

GI number: 15898770

Start: 1786309

End: 1787457

Strand: Reverse

Name: ydcM [C]

Synonym: SSO1974

Alternate gene names: 15898770

Gene position: 1787457-1786309 (Counterclockwise)

Preceding gene: 15898771

Following gene: 15898765

Centisome position: 59.74

GC content: 44.3

Gene sequence:

>1149_bases
ATGGCTAGGAGGGGTAATAAAGCGATCAGAGCAACTGTTTCAATGAAGATCGCCCTCTCTGAACCCCTCCTAGTCCTCGT
GAACAACTACGTTAAGGCACTCCGTTTCACCCTATTTTGGTTGAAAGAAAATGTCCCGAACCCGGAAGAGAAGGGAGTGC
TTTCGAAAGTCCACGAGGCGTTGTACGAGAAGTTAAGGGAGGAGTACAATCTACCATCAAAGGTTGCTGAGGATTGCTAT
AGGGAAGCTCTAGCGACGTACAAGGGTTGGTATAATAATCCTAGAAGAGGACGTTTTCCTAGAGTGTACAGACCTACGGT
ATGGTTAACACCGAGGGCAAGTTATAATGTGGACTTCGAAGCAATGACTGTTAGGATTGTGAGTGTTGGCGAACTTTCAA
TCTTAGGTTATCCTAGAAACCTCAAGGAGTACATGGGTTGGAAGATGAAGGAGGCTAGGTTAGTGATCAGGGATGATAAG
GCTTTCCTTAAAGTTGTTTTTGAGAAAGAGGAGCAGAAGGTTGAGCCAAAGGAAAGTATTGCCGTAGATATAAACATGGC
TGAGGTAGTTGTAGGGAAGGACGATAAGAACTACGTTAGGATCCCAACTCGCCTTGAGGAAGTTCACCACTGGAAGTCGT
TAGCCGAGAGGTTGCTGAAGAAGTATCCAAGGAGGTGGAGGGAGAATAAGAGGATCTTGTATAGAGTTCGTTCTTTCCAT
CTAAAGGCTAGGAGGATTATGGAGGACTTTGCTAGGAAAGTGGGGAAGTGGGTTGTTGATGTAGCAAAGAGAATGGGTGT
TAACGTCATCAAATTGGAGAGTCTTAAGAACCTTATTAAGAGCGTGGAAAAGCTATCTAAGGAGTTTAGGGATAAGTTGT
ATCTTATGCAGTATCGTCGTTTGCAGTACTGGATTTCTTGGCAAGCTAAGAAGCGTGGAATGACTGTTGAGTTTGTTAAT
CCTAGTTATTCTTCTGTTTCATGCCCAAAATGCGGTAAAAGGATGGTTGAGGTTTCTCATCGTTGGTTTAAGTGCTCATG
TGGTTATGAGAATGATCGTGACGTTATTGCAATCATGAATTTAAATGGGAGGGGGTCTCTGACCCTCTCGACTGCCCCTC
AAATGAGGGATGTAAACCCGAACCGATGA

Upstream 100 bases:

>100_bases
TTAATTTCTTTACAAAAATTGGAGGTTAAGGGGGCGGAAAGCCTCGCCAGGGGATGGATAGCCCCCTATATTTAAATACT
TCTTTGTCAAAATTTCATTA

Downstream 100 bases:

>100_bases
GGGGAACCCTCGACCCTTCCAGGGTGGGGAGCTTCCGGTATAAAAACTTTTCCTTGAAAATCGAGCATAGTCCACACTAC
TTACGCAAGTGATGAAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MARRGNKAIRATVSMKIALSEPLLVLVNNYVKALRFTLFWLKENVPNPEEKGVLSKVHEALYEKLREEYNLPSKVAEDCY
REALATYKGWYNNPRRGRFPRVYRPTVWLTPRASYNVDFEAMTVRIVSVGELSILGYPRNLKEYMGWKMKEARLVIRDDK
AFLKVVFEKEEQKVEPKESIAVDINMAEVVVGKDDKNYVRIPTRLEEVHHWKSLAERLLKKYPRRWRENKRILYRVRSFH
LKARRIMEDFARKVGKWVVDVAKRMGVNVIKLESLKNLIKSVEKLSKEFRDKLYLMQYRRLQYWISWQAKKRGMTVEFVN
PSYSSVSCPKCGKRMVEVSHRWFKCSCGYENDRDVIAIMNLNGRGSLTLSTAPQMRDVNPNR

Sequences:

>Translated_382_residues
MARRGNKAIRATVSMKIALSEPLLVLVNNYVKALRFTLFWLKENVPNPEEKGVLSKVHEALYEKLREEYNLPSKVAEDCY
REALATYKGWYNNPRRGRFPRVYRPTVWLTPRASYNVDFEAMTVRIVSVGELSILGYPRNLKEYMGWKMKEARLVIRDDK
AFLKVVFEKEEQKVEPKESIAVDINMAEVVVGKDDKNYVRIPTRLEEVHHWKSLAERLLKKYPRRWRENKRILYRVRSFH
LKARRIMEDFARKVGKWVVDVAKRMGVNVIKLESLKNLIKSVEKLSKEFRDKLYLMQYRRLQYWISWQAKKRGMTVEFVN
PSYSSVSCPKCGKRMVEVSHRWFKCSCGYENDRDVIAIMNLNGRGSLTLSTAPQMRDVNPNR
>Mature_381_residues
ARRGNKAIRATVSMKIALSEPLLVLVNNYVKALRFTLFWLKENVPNPEEKGVLSKVHEALYEKLREEYNLPSKVAEDCYR
EALATYKGWYNNPRRGRFPRVYRPTVWLTPRASYNVDFEAMTVRIVSVGELSILGYPRNLKEYMGWKMKEARLVIRDDKA
FLKVVFEKEEQKVEPKESIAVDINMAEVVVGKDDKNYVRIPTRLEEVHHWKSLAERLLKKYPRRWRENKRILYRVRSFHL
KARRIMEDFARKVGKWVVDVAKRMGVNVIKLESLKNLIKSVEKLSKEFRDKLYLMQYRRLQYWISWQAKKRGMTVEFVNP
SYSSVSCPKCGKRMVEVSHRWFKCSCGYENDRDVIAIMNLNGRGSLTLSTAPQMRDVNPNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095 [H]

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 45152; Mature: 45021

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRGNKAIRATVSMKIALSEPLLVLVNNYVKALRFTLFWLKENVPNPEEKGVLSKVHEA
CCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LYEKLREEYNLPSKVAEDCYREALATYKGWYNNPRRGRFPRVYRPTVWLTPRASYNVDFE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCCCCCE
AMTVRIVSVGELSILGYPRNLKEYMGWKMKEARLVIRDDKAFLKVVFEKEEQKVEPKESI
EEEEEEEEECCEEEECCCCHHHHHCCCCEECCEEEEECCHHHHHHHHHHHHHCCCCCHHE
AVDINMAEVVVGKDDKNYVRIPTRLEEVHHWKSLAERLLKKYPRRWRENKRILYRVRSFH
EEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
LKARRIMEDFARKVGKWVVDVAKRMGVNVIKLESLKNLIKSVEKLSKEFRDKLYLMQYRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQYWISWQAKKRGMTVEFVNPSYSSVSCPKCGKRMVEVSHRWFKCSCGYENDRDVIAIMN
HHHHHEEEHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEEE
LNGRGSLTLSTAPQMRDVNPNR
ECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ARRGNKAIRATVSMKIALSEPLLVLVNNYVKALRFTLFWLKENVPNPEEKGVLSKVHEA
CCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LYEKLREEYNLPSKVAEDCYREALATYKGWYNNPRRGRFPRVYRPTVWLTPRASYNVDFE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEECCCCCCCCCCE
AMTVRIVSVGELSILGYPRNLKEYMGWKMKEARLVIRDDKAFLKVVFEKEEQKVEPKESI
EEEEEEEEECCEEEECCCCHHHHHCCCCEECCEEEEECCHHHHHHHHHHHHHCCCCCHHE
AVDINMAEVVVGKDDKNYVRIPTRLEEVHHWKSLAERLLKKYPRRWRENKRILYRVRSFH
EEEEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
LKARRIMEDFARKVGKWVVDVAKRMGVNVIKLESLKNLIKSVEKLSKEFRDKLYLMQYRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQYWISWQAKKRGMTVEFVNPSYSSVSCPKCGKRMVEVSHRWFKCSCGYENDRDVIAIMN
HHHHHEEEHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCEEEEECCCCCCCCEEEEEE
LNGRGSLTLSTAPQMRDVNPNR
ECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]