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The map label for this gene is rpoM-2

Identifier: 15898710

GI number: 15898710

Start: 1731693

End: 1731971

Strand: Reverse

Name: rpoM-2

Synonym: SSO9221

Alternate gene names: NA

Gene position: 1731971-1731693 (Counterclockwise)

Preceding gene: 15898711

Following gene: 15898708

Centisome position: 57.88

GC content: 34.77

Gene sequence:

>279_bases
ATGCGTTTTTGCCCTAAATGTGGTTCTTTCTTGAAGGTAAAAGGTAACAAAATGGTTTGTAGTAAGTGTGGGTATTCTGA
TCATGATGTAGAGAAAGTAATATTAAAGGAGAATGTAGCTCATGAAAATGATAAGACAATAATTGCAGATGGCGAAACCA
TAGAAGGTAGAGTTGCTATCTCACTCTGTCCTAGATGTGGTTCAGTAAGAGCTATATTGCTTAATAAAAAGAAAAGGCTG
TATAGATGCATGACGTGCAATTTTGTCTATAACATTTAG

Upstream 100 bases:

>100_bases
TTAAACCGAAGAGGGCTGAGATTTTAGGATATGACACACCTTGGCCCGGAGTTAGTATGTTAGCCGCAAGCTTTTATGAT
TAAAAGACTCATTTCTAGAT

Downstream 100 bases:

>100_bases
AAATTTCTTATATCTATACCAGTGGCTTTTTGATAATTTTCAAAACCATATTGTTCAATTATATCCAAGACTAGATCTTT
TTTCTCCTTTACCTTAGGAA

Product: DNA-directed RNA polymerase, subunit M (rpoM-2)

Products: diphosphate; RNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MRFCPKCGSFLKVKGNKMVCSKCGYSDHDVEKVILKENVAHENDKTIIADGETIEGRVAISLCPRCGSVRAILLNKKKRL
YRCMTCNFVYNI

Sequences:

>Translated_92_residues
MRFCPKCGSFLKVKGNKMVCSKCGYSDHDVEKVILKENVAHENDKTIIADGETIEGRVAISLCPRCGSVRAILLNKKKRL
YRCMTCNFVYNI
>Mature_92_residues
MRFCPKCGSFLKVKGNKMVCSKCGYSDHDVEKVILKENVAHENDKTIIADGETIEGRVAISLCPRCGSVRAILLNKKKRL
YRCMTCNFVYNI

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 10403; Mature: 10403

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFCPKCGSFLKVKGNKMVCSKCGYSDHDVEKVILKENVAHENDKTIIADGETIEGRVAI
CCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEE
SLCPRCGSVRAILLNKKKRLYRCMTCNFVYNI
EECCCCCCEEEEEECCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MRFCPKCGSFLKVKGNKMVCSKCGYSDHDVEKVILKENVAHENDKTIIADGETIEGRVAI
CCCCCCCCCEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCEEEE
SLCPRCGSVRAILLNKKKRLYRCMTCNFVYNI
EECCCCCCEEEEEECCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA