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The map label for this gene is 15898627

Identifier: 15898627

GI number: 15898627

Start: 1655768

End: 1656211

Strand: Reverse

Name: 15898627

Synonym: SSO1825

Alternate gene names: NA

Gene position: 1656211-1655768 (Counterclockwise)

Preceding gene: 15898628

Following gene: 15898626

Centisome position: 55.35

GC content: 43.47

Gene sequence:

>444_bases
ATGGGGTTCAATGACGTTTTTCTCCTCATGGGTTATACTACTTCCAAGCTCAAGAACTTCACAGCCTTTAGGAAGTATAA
GGGTAGTTGGGGTAGGAAGCACGGTAAGTCCTACTTCGGGTTTAAGGTCTGTAACCTTGTGGAAAGGAGGACTAATTTCG
TTAGGGACTTCAAGGTTGGATTGGCCAATTTGAGTGATCTAGCCTTTTCATTTGATAACGTTAAGTTAATGGCCGATAGG
GCTTGGATTTCTAGGAAGGACGTCTTAGTTAAGGGTGTTGGTAGTGCTAGGCTTCCGGTTGAGGGTAGTGGTGTTAAGAT
TAGGGAAGGTAAGGCTTCGTCTACAACCTTAAGGGGAGTGGTTATAGAGGTATTCTTCCTTAACCTCTATCGTGATCTCG
AAATTCTTTCGACGAGGATTAGGACGAAGGTACTCGTTAATTAA

Upstream 100 bases:

>100_bases
CGAGGACTACCACATAATTGACACATTCTTCCGTGAGGCTTACCTTGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGA
TCTCACTTGACCTTAAGGAG

Downstream 100 bases:

>100_bases
CGAGGTTCGTTTACGTGTTTACTTGTTGTTATGGCAAATTTTATTGCAAAATTGTACAATTATCTGTATTTTCTCTTGTT
AATACATATTATATTATTCT

Product: second ORF in transposon ISC1212

Products: NA

Alternate protein names: ORF2 In Transposon ISC; Partial Transposase In ISC

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGFNDVFLLMGYTTSKLKNFTAFRKYKGSWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADR
AWISRKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVIEVFFLNLYRDLEILSTRIRTKVLVN

Sequences:

>Translated_147_residues
MGFNDVFLLMGYTTSKLKNFTAFRKYKGSWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADR
AWISRKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVIEVFFLNLYRDLEILSTRIRTKVLVN
>Mature_146_residues
GFNDVFLLMGYTTSKLKNFTAFRKYKGSWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADRA
WISRKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVIEVFFLNLYRDLEILSTRIRTKVLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16698; Mature: 16567

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNDVFLLMGYTTSKLKNFTAFRKYKGSWGRKHGKSYFGFKVCNLVERRTNFVRDFKVG
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LANLSDLAFSFDNVKLMADRAWISRKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGV
HCCHHHHHCCCCCEEEEEHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHH
VIEVFFLNLYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
GFNDVFLLMGYTTSKLKNFTAFRKYKGSWGRKHGKSYFGFKVCNLVERRTNFVRDFKVG
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LANLSDLAFSFDNVKLMADRAWISRKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGV
HCCHHHHHCCCCCEEEEEHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHH
VIEVFFLNLYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA