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The map label for this gene is 15898628

Identifier: 15898628

GI number: 15898628

Start: 1656295

End: 1656723

Strand: Reverse

Name: 15898628

Synonym: SSO1826

Alternate gene names: NA

Gene position: 1656723-1656295 (Counterclockwise)

Preceding gene: 15898629

Following gene: 15898627

Centisome position: 55.37

GC content: 42.42

Gene sequence:

>429_bases
ATGGTAAAGGCAATTTCAACTGAAAAGGACCTCTTACTCAAGGTGGATAAATCCTTCCCTTGGGAAACGTTTAGGAGTAA
GCTTAAGTCCCTTTACTCCAAGAAGCCCAAGTGGGACGTCATCTTACTCCTCAAAGTCCTCCTAATCAAGCTCATTTTCG
ACATCTCTTGGAATAACTTGGAGGGAGAAATTAGGGACAGTAAGAGTTTTATGGACTTCTTGGACGGGAAAATTCCACCA
AAGAGCACAGTATTCTCCTTCTACAAGAAACTCCAACAAACAGTTATTCAAGAGGGCGAGACGATGAGAACAACACTGAT
GGATGAGTTAAACAAGGCTTTGGACAAGGTGATCAGCGAGTATAGGGAAAAGGGCTTTGAACTTGAAGTTGGGAGAGAAA
AAACGATAGGTTCGAGGACTACCACATAA

Upstream 100 bases:

>100_bases
AAGATTCTTGACAATTTTGTACTACACGAGACGTTATCCAAGTTGATTAAAATGGCAATTCATGAGTAATATTAATAAGA
AATTAGGATGAGATAATATT

Downstream 100 bases:

>100_bases
TTGACACATTCTTCCGTGAGGCTTACCTTGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGATCTCACTTGACCTTAAG
GAGATGGGGTTCAATGACGT

Product: transposon ISC1212 Orf1

Products: NA

Alternate protein names: Partial ORF In Transposon ISC

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKLIFDISWNNLEGEIRDSKSFMDFLDGKIPP
KSTVFSFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT

Sequences:

>Translated_142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKLIFDISWNNLEGEIRDSKSFMDFLDGKIPP
KSTVFSFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT
>Mature_142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKLIFDISWNNLEGEIRDSKSFMDFLDGKIPP
KSTVFSFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16573; Mature: 16573

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKLIFDISWNNL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGEIRDSKSFMDFLDGKIPPKSTVFSFYKKLQQTVIQEGETMRTTLMDELNKALDKVISE
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YREKGFELEVGREKTIGSRTTT
HHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKLIFDISWNNL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGEIRDSKSFMDFLDGKIPPKSTVFSFYKKLQQTVIQEGETMRTTLMDELNKALDKVISE
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YREKGFELEVGREKTIGSRTTT
HHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA