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The map label for this gene is 15898472

Identifier: 15898472

GI number: 15898472

Start: 1508573

End: 1509538

Strand: Reverse

Name: 15898472

Synonym: SSO1654

Alternate gene names: NA

Gene position: 1509538-1508573 (Counterclockwise)

Preceding gene: 15898479

Following gene: 15898469

Centisome position: 50.45

GC content: 42.34

Gene sequence:

>966_bases
GTGAGGGTTACCAATATGGACCTCGTAACCCTCGCACAATTAATACTTATGATTCTAAGAAATTTAAATCTTAAGCCGAG
AAAGTACGAGCTAAAGGATATTGCATTAGCATTAGCAGCCTACTCCTTGGGAGTTCAAATCACGAAAACGGGAATCCCAC
CATCAACCCTATACTACTACTTGAGGAAAGTAGGGATAAGGAGGAGAGGAGAAAGCAGACCAACATGTCCATCATGTAAC
TCTAACAGAGTAGTGAAGAACGGTTCATCTAGAGGGAAAGCAAAATACAAGTGTAAAGCGTGTGGAAGGACGTTTTACGA
CGTCACAAGTCATAGAATGGATAGGGAACAGAGGGAGAGAATCTTAAAGGAGTACTTGAACAGGATGAGCATGAGGGCAA
TATCAAGAGTTGAAGGTAAACCATTGACTACTGTTTACAGCCTAGTGAGGAGGGTTGGGATAAGGGCCTTTACGAATCTA
ACGATCTTGAAGGGTGAGCTCAAGAATTTCACAGCTAAGTCTACAGTGTTTGACGAGTTCTGGACTTATTTCCGTGTTAG
GCATGGGGTGATAAGGGAGGATTTGTGGATTTGGACTGCTCTTGCTGATGGTGTGCCTTTCTATGAGTTTGGGGATAGGA
GTTACGGGACTTTTCGTTATCTCTTGGGTTGGTTACCTAGGAGTGAGGTAAACTATACTGACTACTATTGTGTTTATCAA
GTTCTCGATAATCGTGTAGCGAGTAAGAAGTATACTTATCTTGTGGAGAGTCATAATTCTTGGTGTAGGTCTCATTTGGC
GAGGCTGGCTAGGGATACTAAAGCTGTTACTAGGAGTGGGAGGATGGCGGAGTACAGTTTGGCCTTGTTGAATGTAATGT
ACCCTCACGTATTTTCAAAGGAGAGAACTCCCTTAAATGAGACATACTTGAAGGGAGTACAGTATATTAGAGAAAACTTG
ATATAG

Upstream 100 bases:

>100_bases
AATTTCCACAATTAGTCGTTTCGATCGAGATGCAGCCAATGAATTAGAACATGAAAACAGCCTCTGAAAAAGCTTATGTG
CGAGGGTTACGAGATTTTTT

Downstream 100 bases:

>100_bases
TTTTACTATATGATATCGAATAAGATGACTGCATGAGAACACTCCCTATCATCTCTCTCTTTTTTAGATAGTTCTCCATA
TAAGAAAGGAACTTCAGTAT

Product: transposase ISC1173

Products: NA

Alternate protein names: IS1 Transposase; Transposon; Second ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC; Partial Transposase In ISC

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGKAKYKCKACGRTFYDVTSHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRVGIRAFTNL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVIREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMAEYSLALLNVMYPHVFSKERTPLNETYLKGVQYIRENL
I

Sequences:

>Translated_321_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGKAKYKCKACGRTFYDVTSHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRVGIRAFTNL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVIREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMAEYSLALLNVMYPHVFSKERTPLNETYLKGVQYIRENL
I
>Mature_321_residues
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYYLRKVGIRRRGESRPTCPSCN
SNRVVKNGSSRGKAKYKCKACGRTFYDVTSHRMDREQRERILKEYLNRMSMRAISRVEGKPLTTVYSLVRRVGIRAFTNL
TILKGELKNFTAKSTVFDEFWTYFRVRHGVIREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMAEYSLALLNVMYPHVFSKERTPLNETYLKGVQYIRENL
I

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37541; Mature: 37541

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LRKVGIRRRGESRPTCPSCNSNRVVKNGSSRGKAKYKCKACGRTFYDVTSHRMDREQRER
HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHCCHHHHHHHHHCCHHHHHH
ILKEYLNRMSMRAISRVEGKPLTTVYSLVRRVGIRAFTNLTILKGELKNFTAKSTVFDEF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHH
WTYFRVRHGVIREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMAEYSLALLNVMYPHVFSK
HHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
ERTPLNETYLKGVQYIRENLI
CCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVTNMDLVTLAQLILMILRNLNLKPRKYELKDIALALAAYSLGVQITKTGIPPSTLYYY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
LRKVGIRRRGESRPTCPSCNSNRVVKNGSSRGKAKYKCKACGRTFYDVTSHRMDREQRER
HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHCCHHHHHHHHHCCHHHHHH
ILKEYLNRMSMRAISRVEGKPLTTVYSLVRRVGIRAFTNLTILKGELKNFTAKSTVFDEF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHH
WTYFRVRHGVIREDLWIWTALADGVPFYEFGDRSYGTFRYLLGWLPRSEVNYTDYYCVYQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH
VLDNRVASKKYTYLVESHNSWCRSHLARLARDTKAVTRSGRMAEYSLALLNVMYPHVFSK
HHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
ERTPLNETYLKGVQYIRENLI
CCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA