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The map label for this gene is 15898202

Identifier: 15898202

GI number: 15898202

Start: 1198232

End: 1198675

Strand: Direct

Name: 15898202

Synonym: SSO1362

Alternate gene names: NA

Gene position: 1198232-1198675 (Clockwise)

Preceding gene: 15898198

Following gene: 15898203

Centisome position: 40.04

GC content: 38.74

Gene sequence:

>444_bases
ATGCAAGATTTGGTTCAAGCTTATAAGGAAGAGAAGAACGCGAGAATTAAGGAGAGGATTCTTGCAGTGAAGCTGCACGT
AGTTGATGGTAAATCGGAGAAAGAAGTTTCGAAAATGCTTAACAAGGGCTATTCCACGATAAAATTGTGGATTGGCAAGT
ACAAGAAAGAAGGTCTTGATGGACTAAAGGACAAGCCCAGATCAGGAAGACCCAGAAAAGTAGAAGAGGAAAAGATAAAA
CAAATTCTGGAAGATAAGCCCCAAAAATACGGAATACAACAAGAATATTGGACAATGAAAACACTCAAGATAGCACTACA
AGAACAAGGAATAGAATACAAGAAATCCAGACTATACGAACTAGTCCACGAACTAGGATACAACCTAGTAAAACCCAGAC
CTACCAACATCCAAGCAGAAAAGGACAAGTGGGAAGATTTTTAA

Upstream 100 bases:

>100_bases
ATTGTAATTTATAAATATGCAATTGTAAAAATAATATGTTAATATTGATAATCGTTAGTGTTTCCGAAAAGTTTATAGAT
TAGTATTACCAGATTGAACT

Downstream 100 bases:

>100_bases
AAAAAATAAAGAAATTGGAAAGAAAGGCACTGTTCTTTCTAGACGAGTGTAGGACAGTAATTAGCACGTCAATTAAGAAG
GTTCTAGCTAAGGTTGGCAG

Product: transposon ISC1048 Orf1

Products: NA

Alternate protein names: ORF1 In Transposon ISC; Transposase And Inactivated Derivative; Transposase; Transposase ISC

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDF

Sequences:

>Translated_147_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDF
>Mature_147_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDF

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17436; Mature: 17436

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVHELGYNLVKPRPTNIQAEKDKWEDF
HHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVHELGYNLVKPRPTNIQAEKDKWEDF
HHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA