Click here to switch to the map view.

The map label for this gene is 15898034

Identifier: 15898034

GI number: 15898034

Start: 1023274

End: 1023528

Strand: Reverse

Name: 15898034

Synonym: SSO7351

Alternate gene names: NA

Gene position: 1023528-1023274 (Counterclockwise)

Preceding gene: 15898037

Following gene: 15898033

Centisome position: 34.21

GC content: 40.0

Gene sequence:

>255_bases
ATGCAAACCATACAAGTATCCAAAACGGAGTTAAAGTCCCTCGCTATAACTTTAGCAACAATCAATATTAACGTTATCTC
CCAAGATCTAGACCCGGAAATAGTGAAAGCAGCACCATCCTTGCTAACCGGAAACAGAGGAAAATACTACTTGAAGGTAG
TAAGACAAGGCGAGAAAGTAATTAGTAAAGGTCAGAGAACCTTCAAGTTCTACCCAATCTACAGAGAAGTAAAGAGAGAG
ACCAACGTAGTGTAG

Upstream 100 bases:

>100_bases
AAGAGTAATACCATTTGTCTAGTATTATCAATGAGAGAGAGTAGGTGGAAGGACGAGATGAACAAGAAAAGGTTAAAGCG
AGGGACTCCATAACCCCGTT

Downstream 100 bases:

>100_bases
ATGAGACCGGATTAACCGTGGGAGAAAAGGAACAAGAAAAAGCAGAGGGCTTTCTACTCTACAACTGGAAGAGAAAAGGA
ATAAAGATGAGATCCTTGAA

Product: transposon ISC1439 Orf1

Products: NA

Alternate protein names: ORF1 In Transposon ISC; Transposon

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MQTIQVSKTELKSLAITLATININVISQDLDPEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKRE
TNVV

Sequences:

>Translated_84_residues
MQTIQVSKTELKSLAITLATININVISQDLDPEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKRE
TNVV
>Mature_84_residues
MQTIQVSKTELKSLAITLATININVISQDLDPEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKRE
TNVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9540; Mature: 9540

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIQVSKTELKSLAITLATININVISQDLDPEIVKAAPSLLTGNRGKYYLKVVRQGEKV
CCCEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHCCHHHCCCCCCEEHHHHHHHHHH
ISKGQRTFKFYPIYREVKRETNVV
HHCCCCEEEEEHHHHHHHHHCCCC
>Mature Secondary Structure
MQTIQVSKTELKSLAITLATININVISQDLDPEIVKAAPSLLTGNRGKYYLKVVRQGEKV
CCCEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHCCHHHCCCCCCEEHHHHHHHHHH
ISKGQRTFKFYPIYREVKRETNVV
HHCCCCEEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA