Click here to switch to the map view.

The map label for this gene is 15898033

Identifier: 15898033

GI number: 15898033

Start: 1022567

End: 1023256

Strand: Reverse

Name: 15898033

Synonym: SSO1180

Alternate gene names: NA

Gene position: 1023256-1022567 (Counterclockwise)

Preceding gene: 15898034

Following gene: 15898032

Centisome position: 34.2

GC content: 43.19

Gene sequence:

>690_bases
GTGGGAGAAAAGGAACAAGAAAAAGCAGAGGGCTTTCTACTCTACAACTGGAAGAGAAAAGGAATAAAGATGAGATCCTT
GAACCTCGTATATCCCTTAAGGTTACCCCTCCTAGTGGAGGTAGCAGATTTGAGAAGTGACAGTCCATCACAGTTCCTAC
TCAGGAGCGTGATGGAAGTAAGCCAATACATGGAAATAGATTACGTTGTAGCTGACGCCGGATTCTTGAACCTAGGGGTC
ATCAAGGAAATGCCCGTGAAGACCATTGTGAGAGGAAAGTCAAACTTGAAGGGATTCAAGGAACTATCTAACGTTCCATT
AGTTGAGAAGAGATATGAGGTTAAGGACAGGGTTTACGTTGCGTATAGGGTCTTGAAATTTGAAGGGCTTTATTATTACG
ATGTGGTTTACGTTAAGGGAAAGCCGAGGCACTTCATCTTCGTGACGAACTTCGAGGGAGATCCCTATGAACTGGCTGAA
CTCTATAGGTTGAGGTGGCAGGTTGAGGAGGGTTTCAAGGTTAGGAAGGCAAGGATAAGGTATGTTAGGAAGTTGAGTAA
TAAGATCTTCTTGTTCCTCTATTACACGGTTCTGGATTCTGCGTGGAATCTAGTGAATCATCTTCTCTTTAACTTCAAGT
CCACGTGTAAGAAGGGTTTGTCCTTCGATTTATTCGTCAAGCTTCTCTAA

Upstream 100 bases:

>100_bases
AGAAAGTAATTAGTAAAGGTCAGAGAACCTTCAAGTTCTACCCAATCTACAGAGAAGTAAAGAGAGAGACCAACGTAGTG
TAGATGAGACCGGATTAACC

Downstream 100 bases:

>100_bases
CTTTCTCGGTGTTCAGAGGAGACTATGCACGTCGTTTTCACCACGTGAGAAAAATTCAGAATTCTCCTCTTATTATTAGA
ATTGTACGCTATATTTTTTG

Product: second ORF in transposon ISC1439

Products: NA

Alternate protein names: Transposon

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGEKEQEKAEGFLLYNWKRKGIKMRSLNLVYPLRLPLLVEVADLRSDSPSQFLLRSVMEVSQYMEIDYVVADAGFLNLGV
IKEMPVKTIVRGKSNLKGFKELSNVPLVEKRYEVKDRVYVAYRVLKFEGLYYYDVVYVKGKPRHFIFVTNFEGDPYELAE
LYRLRWQVEEGFKVRKARIRYVRKLSNKIFLFLYYTVLDSAWNLVNHLLFNFKSTCKKGLSFDLFVKLL

Sequences:

>Translated_229_residues
MGEKEQEKAEGFLLYNWKRKGIKMRSLNLVYPLRLPLLVEVADLRSDSPSQFLLRSVMEVSQYMEIDYVVADAGFLNLGV
IKEMPVKTIVRGKSNLKGFKELSNVPLVEKRYEVKDRVYVAYRVLKFEGLYYYDVVYVKGKPRHFIFVTNFEGDPYELAE
LYRLRWQVEEGFKVRKARIRYVRKLSNKIFLFLYYTVLDSAWNLVNHLLFNFKSTCKKGLSFDLFVKLL
>Mature_228_residues
GEKEQEKAEGFLLYNWKRKGIKMRSLNLVYPLRLPLLVEVADLRSDSPSQFLLRSVMEVSQYMEIDYVVADAGFLNLGVI
KEMPVKTIVRGKSNLKGFKELSNVPLVEKRYEVKDRVYVAYRVLKFEGLYYYDVVYVKGKPRHFIFVTNFEGDPYELAEL
YRLRWQVEEGFKVRKARIRYVRKLSNKIFLFLYYTVLDSAWNLVNHLLFNFKSTCKKGLSFDLFVKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27133; Mature: 27002

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKEQEKAEGFLLYNWKRKGIKMRSLNLVYPLRLPLLVEVADLRSDSPSQFLLRSVMEV
CCCCHHHHHCCEEEEEEECCCEEEEEEEEEEECCCCHHEEEHHCCCCCHHHHHHHHHHHH
SQYMEIDYVVADAGFLNLGVIKEMPVKTIVRGKSNLKGFKELSNVPLVEKRYEVKDRVYV
HHHHHEEEEEECCCEEECCHHHHCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHEE
AYRVLKFEGLYYYDVVYVKGKPRHFIFVTNFEGDPYELAELYRLRWQVEEGFKVRKARIR
EEEEHHCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
YVRKLSNKIFLFLYYTVLDSAWNLVNHLLFNFKSTCKKGLSFDLFVKLL
HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
>Mature Secondary Structure 
GEKEQEKAEGFLLYNWKRKGIKMRSLNLVYPLRLPLLVEVADLRSDSPSQFLLRSVMEV
CCCHHHHHCCEEEEEEECCCEEEEEEEEEEECCCCHHEEEHHCCCCCHHHHHHHHHHHH
SQYMEIDYVVADAGFLNLGVIKEMPVKTIVRGKSNLKGFKELSNVPLVEKRYEVKDRVYV
HHHHHEEEEEECCCEEECCHHHHCCHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHEE
AYRVLKFEGLYYYDVVYVKGKPRHFIFVTNFEGDPYELAELYRLRWQVEEGFKVRKARIR
EEEEHHCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
YVRKLSNKIFLFLYYTVLDSAWNLVNHLLFNFKSTCKKGLSFDLFVKLL
HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA