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The map label for this gene is arlR [H]

Identifier: 15926995

GI number: 15926995

Start: 1423544

End: 1423789

Strand: Reverse

Name: arlR [H]

Synonym: SA1247

Alternate gene names: 15926995

Gene position: 1423789-1423544 (Counterclockwise)

Preceding gene: 15926996

Following gene: 15926994

Centisome position: 50.58

GC content: 32.52

Gene sequence:

>246_bases
GTGACGGTAAATGGCGCAGAAATTGAATTAACAAAAACAGAGTATGATTTACTATATCTTCTAGCTGAAAATAAAAACCA
TGTTATGCAACGGGAACAAATTTTAAATCATGTATGGGGTTATAATAGTGAAGTAGAAACAAATGTCGTAGATGTTTATA
TAAGATATTTACGAAACAAGTTAAAACCATACGATCGTGACAAAATGATTGAAACAGTTCGTGGCGTTGGGTATGTGATA
CGATGA

Upstream 100 bases:

>100_bases
TTAAGCCGTTTGATATTGAAGAACTTTTAGCAAGAATTCGTGCAATTTTACGTCGTCAGCCACAAAAGGATATTATCGAT
GTCAACGGAACGCTTTTAAA

Downstream 100 bases:

>100_bases
CAAAACGTAAATTGCGCAATAACTGGATTATTGTTACCACGATGATTACGTTTGTCACGATATTTTTGTTTTGTTTAATT
ATTATTTTTTTCTTGAAAGA

Product: truncated (putative response regulator ArlR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVI
R

Sequences:

>Translated_81_residues
MTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVI
R
>Mature_80_residues
TVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=71, Percent_Identity=49.2957746478873, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI87082012, Length=72, Percent_Identity=43.0555555555556, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1786784, Length=80, Percent_Identity=37.5, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 9663; Mature: 9532

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNK
CCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LKPYDRDKMIETVRGVGYVIR
CCCCCHHHHHHHHHHCCEECC
>Mature Secondary Structure 
TVNGAEIELTKTEYDLLYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNK
CCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LKPYDRDKMIETVRGVGYVIR
CCCCCHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA