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The map label for this gene is ykpA [H]

Identifier: 15926972

GI number: 15926972

Start: 1397080

End: 1398681

Strand: Direct

Name: ykpA [H]

Synonym: SA1224

Alternate gene names: 15926972

Gene position: 1397080-1398681 (Clockwise)

Preceding gene: 15926970

Following gene: 15926973

Centisome position: 49.63

GC content: 33.21

Gene sequence:

>1602_bases
ATGTTACAAGTAACTGATGTGAGTTTACGTTTTGGAGATCGTAAACTATTTGAAGATGTAAATATTAAATTTACAGAAGG
TAATTGTTATGGATTAATTGGTGCGAATGGTGCAGGTAAATCAACATTCTTAAAAATATTATCTGGTGAATTAGATTCTC
AAACAGGACATGTTTCATTAGGTAAAAATGAACGTCTAGCTGTTTTAAAACAGGACCACTATGCTTATGAAGATGAACGC
GTGCTTGATGTTGTAATTAAAGGTCACGAACGTCTTTATGAGGTTATGAAAGAAAAAGATGAAATCTATATGAAGCCAGA
TTTCAGTGATGAAGATGGTATCCGTGCTGCTGAACTTGAAGGTGAATTTGCAGAAATGAATGGTTGGAATGCTGAAGCTG
ATGCTGCTAACCTTTTATCTGGTTTAGGTATCGATCCAACTTTACACGATAAAAAAATGGCTGAATTAGAAAACAACCAA
AAAATTAAAGTATTATTAGCGCAAAGTTTATTCGGTGAACCAGACGTACTATTACTGGATGAGCCTACTAACGGTCTCGA
TATTCCAGCAATCAGTTGGTTAGAAGATTTCTTAATTAACTTTGATAATACTGTTATCGTAGTATCGCATGACCGTCATT
TCTTAAATAATGTATGTACTCATATCGCTGATTTAGACTTCGGTAAAATTAAAGTTTATGTTGGTAACTATGATTTTTGG
TATCAATCTAGTCAGTTAGCTCAAAAGATGGCTCAAGAACAAAACAAGAAAAAAGAAGAAAAAATGAAAGAGTTACAGGA
CTTTATTGCACGTTTCTCAGCTAACGCTTCTAAATCTAAACAAGCAACAAGTCGTAAAAAACAACTTGAGAAAATTGAAT
TAGATGATATTCAACCATCATCAAGAAGATATCCTTTCGTTAAATTCACGCCTGAGCGTGAGATTGGTAACGACTTATTA
ATCGTTCAAAATCTTTCTAAAACAATTGACGGCGAAAAAGTATTAGATAATGTATCATTCACAATGAATCCAAATGATAA
AGCGATTTTAATTGGAGATAGTGAAATTGCAAAAACAACATTACTTAAAATATTAGCTGGCGAAATGGAACCAGACGAAG
GTTCATTTAAATGGGGTGTTACTACATCATTAAGTTACTTCCCTAAAGATAACTCAGAGTTCTTTGAGGGTGTAAATATG
AATCTCGTTGATTGGTTAAGACAATATGCTCCTGAAGATGAACAAACAGAAACATTTTTACGTGGTTTCTTAGGTCGTAT
GTTATTTAGTGGTGAAGAAGTTAAGAAAAAAGCTAGTGTGCTTTCAGGTGGAGAAAAAGTACGTTGTATGCTAAGTAAAA
TGATGTTATCAAGTGCGAATGTACTTTTACTTGACGAACCTACTAACCACTTAGACTTAGAAAGTATTACTGCTGTCAAT
GATGGTCTTAAATCATTTAAAGGTTCTATCATCTTTACTTCTTATGACTTCGAATTTATCAACACGATTGCAAACCGTGT
TATCGATTTAAATAAACAAGGCGGCGTTTCAAAAGAAATTCCATATGAAGAATACTTGCAAGAAATCGGCGTTTTAAAAT
AA

Upstream 100 bases:

>100_bases
GAGTCATTCTATCATTACAACTTATATGAGGTCGAAACTGTGACGATAATATGATATAATTCTTCCGTTAGAATATCGAA
TGAAAAAAAGGAGAAAATGC

Downstream 100 bases:

>100_bases
ACATAATATGTAGAATTTCTTTTCGAAAATCTCTGTATTGAGGCCCGACCAACTTGCACATTATTGTAAGTTGGCTTACT
GTCACCTTCTATATTGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDER
VLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFW
YQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLL
IVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNM
NLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK

Sequences:

>Translated_533_residues
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDER
VLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFW
YQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLL
IVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNM
NLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK
>Mature_533_residues
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDER
VLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQ
KIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFW
YQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLL
IVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNM
NLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
DGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=31.1195445920304, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI10947137, Length=523, Percent_Identity=29.6367112810707, Blast_Score=225, Evalue=9e-59,
Organism=Homo sapiens, GI27881506, Length=523, Percent_Identity=29.6367112810707, Blast_Score=225, Evalue=1e-58,
Organism=Homo sapiens, GI10947135, Length=552, Percent_Identity=28.0797101449275, Blast_Score=176, Evalue=6e-44,
Organism=Homo sapiens, GI69354671, Length=552, Percent_Identity=28.0797101449275, Blast_Score=176, Evalue=7e-44,
Organism=Escherichia coli, GI1787041, Length=533, Percent_Identity=45.4033771106942, Blast_Score=506, Evalue=1e-144,
Organism=Escherichia coli, GI1789751, Length=508, Percent_Identity=32.2834645669291, Blast_Score=265, Evalue=7e-72,
Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=30.0380228136882, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI1787182, Length=506, Percent_Identity=29.4466403162055, Blast_Score=212, Evalue=4e-56,
Organism=Escherichia coli, GI1786975, Length=500, Percent_Identity=20.4, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=26.3374485596708, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=29.4372294372294, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=24.2574257425743, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786698, Length=222, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994943, Length=296, Percent_Identity=23.6486486486486, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=24.2553191489362, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788644, Length=242, Percent_Identity=26.0330578512397, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=519, Percent_Identity=28.3236994219653, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17553372, Length=547, Percent_Identity=28.7020109689214, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=535, Percent_Identity=26.9158878504673, Blast_Score=193, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320874, Length=516, Percent_Identity=31.2015503875969, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=538, Percent_Identity=29.368029739777, Blast_Score=226, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6325030, Length=234, Percent_Identity=30.3418803418803, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=245, Percent_Identity=29.3877551020408, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6323278, Length=385, Percent_Identity=23.8961038961039, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320266, Length=231, Percent_Identity=25.1082251082251, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666836, Length=535, Percent_Identity=29.9065420560748, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24642252, Length=539, Percent_Identity=26.9016697588126, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI18859989, Length=539, Percent_Identity=26.9016697588126, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24641342, Length=500, Percent_Identity=29.4, Blast_Score=209, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60227; Mature: 60227

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSL
CEEEEEEEEECCCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
GKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELE
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECC
GEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQKIKVLLAQSLFGEPDVLLLD
CCHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHCCCCCEEEEE
EPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEHE
YQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTT
CCCCCEEEECCCHHCCCCEEEEECHHHHCCCHHHHCCCEEEECCCCCEEEEECCHHHHHH
LLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNMNLVDWLRQYAPEDEQTETFL
HHHHHHCCCCCCCCCEEECEEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHH
RGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK
HHHHHHCCCEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSL
CEEEEEEEEECCCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
GKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELE
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECC
GEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQKIKVLLAQSLFGEPDVLLLD
CCHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHCCCCCEEEEE
EPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEHE
YQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTT
CCCCCEEEECCCHHCCCCEEEEECHHHHCCCHHHHCCCEEEECCCCCEEEEECCHHHHHH
LLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNMNLVDWLRQYAPEDEQTETFL
HHHHHHCCCCCCCCCEEECEEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHH
RGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVN
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK
HHHHHHCCCEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]