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The map label for this gene is truncated-SA

Identifier: 15926970

GI number: 15926970

Start: 1395599

End: 1395895

Strand: Direct

Name: truncated-SA

Synonym: SA1222

Alternate gene names: NA

Gene position: 1395599-1395895 (Clockwise)

Preceding gene: 15926964

Following gene: 15926972

Centisome position: 49.58

GC content: 28.96

Gene sequence:

>297_bases
TTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCATAGAAAAATTTA
TGTAGAGCCTGTTTTTGGATTTATGAAGGTTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAAC
GAGAGCTAGGTTTTGTATTAATGGCACTTAATATAAGGAAAATAGCAGCTCAACGAGCTGTACATTATAAAATACATATC
AAAAAAGCTAATTTCCATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAA

Upstream 100 bases:

>100_bases
GACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACG
TATTAACATGTAATTTTACT

Downstream 100 bases:

>100_bases
GAACTTAATGTCCCAGCCTATTCGTTTGAATTATTTAATTTTTTACTTTGAAAGGAATGTTTAAAAAACTACTTCATCTG
TCCGACTTAATATTGAATAT

Product: putative transposase

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase IS4 Family Protein

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGINKVKRELGFVLMALNIRKIAAQRAVHYKIHI
KKANFHQIINRNQLFYIA

Sequences:

>Translated_98_residues
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGINKVKRELGFVLMALNIRKIAAQRAVHYKIHI
KKANFHQIINRNQLFYIA
>Mature_98_residues
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGINKVKRELGFVLMALNIRKIAAQRAVHYKIHI
KKANFHQIINRNQLFYIA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11619; Mature: 11619

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGINKVKRELGFVL
CCCHHHHHHHHCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALNIRKIAAQRAVHYKIHIKKANFHQIINRNQLFYIA
HHHHHHHHHHHHHEEEEEEEEECHHHHHHCCCCEEEEC
>Mature Secondary Structure
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGINKVKRELGFVL
CCCHHHHHHHHCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALNIRKIAAQRAVHYKIHIKKANFHQIINRNQLFYIA
HHHHHHHHHHHHHEEEEEEEEECHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA