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The map label for this gene is ynbB [H]

Identifier: 15926890

GI number: 15926890

Start: 1305297

End: 1306535

Strand: Direct

Name: ynbB [H]

Synonym: SA1148

Alternate gene names: 15926890

Gene position: 1305297-1306535 (Clockwise)

Preceding gene: 15926889

Following gene: 15926891

Centisome position: 46.37

GC content: 35.11

Gene sequence:

>1239_bases
ATGAAAGATATAAGTAAGATAGTAGCTGACGTCGAATCAACGTTAGCACCATATTTTAAAGAAATTGAAGAAACAGCATA
TATTAATCAAGAAAAAGTATTAAATGCATTTCATCATGTCAAAGCAACCGAAAGTGATCTACAAGGATCAACAGGATACG
GGTATGATGACTTTGGACGTGATCATTTAGAAGAAATATATGCGCAGGCATTTAAAGCAGAAGATGCAATTGTTCGTCCG
CAAATTATTTCAGGTACGCATGCGATTACTATTGCATTACAAAGTTTATTAAAACATGGTGATGAATTAATTTATATAAC
GGGTAGTCCATATGACACTTTACTTGAAGTCATTGGCGTAAACGGAAATGGTATTGAAAGTTTAATGGAGCACGGCGTAT
CGTATAAAGATATTGCACTTAAAGAAGGTAAGATCGATATTGAAAGTGTGTTAGATGGGGTTTCTGAGCGCACCAAAGTA
ATAGCGATTCAACGTTCGAAAGGCTATGATCAAAGACCTTCAATTCCGCTAGATGAAATTGAAAAGGTAATTACTAGGTT
GAAAAACGTGCATCCTAATATTTTAATATTTGTGGATAACTGTTATGGGGAATTTGTTGAAAGACGTGAACCTATAGAAT
GTGGTGCCGATTTAATAGCAGGATCATTAATTAAAAACCCTGGCGGTGGTTTAGCTAAGATTGGTGGATACATTGCTGGT
AGAAAAGATTTAATTGAACGATGTGGTTATAGATTGACAGCACCTGGTATTGGTAAAGAAGCGGGTGCATCATTAAATGC
ATTGCTTGAAATGTATCAAGGTTTCTTTTTAGCACCACACGTTGTCAGTCAGAGTCTTAAAGGTGCATTGTTTACTAGTT
TATTTTTAGAAAAAATGAATATGAACACAACGCCGAAGTACTACGAAAAACGAACTGATTTAATTCAAACAGTTAAATTT
GAAACGAAAGAACAAATGATTTCATTTTGTCAAAGTATTCAACACGCATCCCCAATTAATGCACATTTTAGTCCAGAACC
TAGTTATATGCCTGGTTACGAAGATGATGTTATTATGGCAGCTGGTACGTTTATTCAAGGTTCATCGATTGAATTATCTG
CAGATGGACCTATTCGTCCTCCTTATGAAGCATATGTTCAAGGAGGATTAACATATGAACACGTTAAAATTGCTGTGACA
AGAGCTGTTAATCAGTTGAAAGAACAAGGACTTATATAA

Upstream 100 bases:

>100_bases
TCTAAAACAACATACATTAGTGACTGAACTTAAATATGATGAAATTGAAAATGTTTATCGTATAAAAGGATTTAAAAAAT
AATAAAAGGACGAAATTCAA

Downstream 100 bases:

>100_bases
TAGATTAAATTTCACCCTAAATGATAATGTGTCTTGGGTGAAATTTTTTGCGGAGATTTATCAGATTATTTTTAAAAATT
GAAAAAATATTTTAGCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKV
IAIQRSKGYDQRPSIPLDEIEKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
ETKEQMISFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVNQLKEQGLI

Sequences:

>Translated_412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKV
IAIQRSKGYDQRPSIPLDEIEKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
ETKEQMISFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVNQLKEQGLI
>Mature_412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKV
IAIQRSKGYDQRPSIPLDEIEKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
ETKEQMISFCQSIQHASPINAHFSPEPSYMPGYEDDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVNQLKEQGLI

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45488; Mature: 45488

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCH
DHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGV
HHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC
NGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKVIAIQRSKGYDQRPSIPLDEI
CCCCHHHHHHCCCCCHHEEECCCCCCHHHHHCCHHHCCEEEEEECCCCCCCCCCCCHHHH
EKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
HHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMN
HHHHHHHCCCEECCCCCCCHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
MNTTPKYYEKRTDLIQTVKFETKEQMISFCQSIQHASPINAHFSPEPSYMPGYEDDVIMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVNQLKEQGLI
ECCEEECCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCH
DHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGV
HHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC
NGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERTKVIAIQRSKGYDQRPSIPLDEI
CCCCHHHHHHCCCCCHHEEECCCCCCHHHHHCCHHHCCEEEEEECCCCCCCCCCCCHHHH
EKVITRLKNVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
HHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMN
HHHHHHHCCCEECCCCCCCHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
MNTTPKYYEKRTDLIQTVKFETKEQMISFCQSIQHASPINAHFSPEPSYMPGYEDDVIMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVNQLKEQGLI
ECCEEECCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]