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The map label for this gene is ylxR [H]

Identifier: 15926850

GI number: 15926850

Start: 1260162

End: 1260446

Strand: Direct

Name: ylxR [H]

Synonym: SA1110

Alternate gene names: 15926850

Gene position: 1260162-1260446 (Clockwise)

Preceding gene: 15926849

Following gene: 15926851

Centisome position: 44.77

GC content: 30.18

Gene sequence:

>285_bases
ATGAAAAAGAAAAAAATTCCGATGCGAAAATGTATTCTTTCAAATGAAATGCATCCCAAAAAAGATATGATTCGTGTTGT
TGTTAATAAAGAAGGCGAAATCTTTGCGGATGTTACTGGAAAGAAACAAGGCCGTGGCGCATATGTTTCTAAAGATGTTG
CTATGGTTGAAAAAGCACAACAAAAAGAAATTTTAGAAAAATATTTTAAAGCATCTAAAGAGCAATTGGATCCTGTTTAC
AAAGAAATTATTAGATTAATTTATAGAGAAGAGATTCCAAAATGA

Upstream 100 bases:

>100_bases
AAGATGCTGACACAACAGAATCAACCGAAGAGGTAAATGATGTTTCAGTTGAAACAAATGTAGAGAAAGAATCTGAATAA
TAGGTTGGAGTGAAGTATCT

Downstream 100 bases:

>100_bases
GTATAGATCAAATATTAAACTTTTTAGGATTAGCAATGAGAGCTGGTAAAGTAAAAACAGGTGAATCAGTCATTGTTAAT
GAGATTAAAAAAGGAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVY
KEIIRLIYREEIPK

Sequences:

>Translated_94_residues
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVY
KEIIRLIYREEIPK
>Mature_94_residues
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVY
KEIIRLIYREEIPK

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 11040; Mature: 11040

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQ
CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
QKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQ
CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
QKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]