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The map label for this gene is set15

Identifier: 15926111

GI number: 15926111

Start: 454143

End: 454826

Strand: Direct

Name: set15

Synonym: SA0393

Alternate gene names: NA

Gene position: 454143-454826 (Clockwise)

Preceding gene: 15926110

Following gene: 15926112

Centisome position: 16.13

GC content: 29.82

Gene sequence:

>684_bases
ATGAAATTAAAAAATATTGCTAAAGCAAGTTTAGCACTAGGGATTTTAACAACAGGTATGATTACAACTACTGCTCAGCC
AGTAAAAGCAAGTACATTAGAGGTTAGATCACAAGCTACTCAAGACTTGAGTGAATATTATAAAGGGAGAGGATTTGAAT
TAACAAATGTAACAGGATATAAATACGGAAATAAAGTTACATTTATAGATAATTCTCAACAAATTGATGTTACATTGACA
GGAAATGAAAAATTAACTGTTAAAGATGATGACGAAGTTTCTAATGTTGACGTGTTTGTAGTAAGAGAAGGTAGTGACAA
ATCAGCTATCACAACATCGATTGGTGGAATTACAAAGACAAATGGGACTCAACATAAAGATACTGTTCAAAACGTTAATT
TGTCAGTTTCTAAGAGTACAGGTCAACACACTACTTCTGTGACTTCAGAATACTATAGCATCTATAAAGAAGAAATCTCA
TTAAAAGAACTTGATTTTAAATTAAGAAAGCATTTAATTGATAAACATGATCTTTATAAGACAGAACCTAAAGACAGTAA
AATTAGAATTACTATGAAAAACGGTGGCTATTATACATTTGAATTAAATAAAAAATTACAGCCTCATCGCATGGGTGATA
CGATTGATAGTAGAAATATAGAGAAAATTGAAGTGAATTTATAA

Upstream 100 bases:

>100_bases
TTAATGTGAAGCACGACCATTGCTCATTATAATGAATGAGGATTGTTCGTATTGCGTAATAGAATAAATCAAATAGACTA
AAAATTGGGAGCATAGAATT

Downstream 100 bases:

>100_bases
TAATATTCGAGGGAGTATATCATGAGAGAAAATTTTAAATTACGTAAAATGAAAGTCGGTTTAGTATCAGTTGCAATTAC
TATGTTATATATCATGACAA

Product: superantigen-like protein

Products: NA

Alternate protein names: Superantigen-Like; Exotoxin; Exotoxin-Like Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGYKYGNKVTFIDNSQQIDVTLT
GNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEIS
LKELDFKLRKHLIDKHDLYKTEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL

Sequences:

>Translated_227_residues
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGYKYGNKVTFIDNSQQIDVTLT
GNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEIS
LKELDFKLRKHLIDKHDLYKTEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL
>Mature_227_residues
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGYKYGNKVTFIDNSQQIDVTLT
GNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEIS
LKELDFKLRKHLIDKHDLYKTEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25440; Mature: 25440

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGY
CCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCE
KYGNKVTFIDNSQQIDVTLTGNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKT
ECCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCEECC
NGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEISLKELDFKLRKHLIDKHDLYK
CCCCCCHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCC
TEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL
CCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGY
CCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCE
KYGNKVTFIDNSQQIDVTLTGNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKT
ECCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCEECC
NGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEISLKELDFKLRKHLIDKHDLYK
CCCCCCHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCC
TEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL
CCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA