Click here to switch to the map view.

The map label for this gene is set6

Identifier: 15926099

GI number: 15926099

Start: 441102

End: 441782

Strand: Direct

Name: set6

Synonym: SA0382

Alternate gene names: NA

Gene position: 441102-441782 (Clockwise)

Preceding gene: 15926092

Following gene: 15926100

Centisome position: 15.67

GC content: 30.84

Gene sequence:

>681_bases
ATGAAATTTAAAGCGATAGCAAAAGCAAGTTTAGCATTGGGAATGTTAGCAACAGGTGTAATTACATCGAATGTACAATC
AGTACAAGCGAAAACAGAAGTTAAACAACAAAGTGAATCAGAGTTGAAACACTATTATAATAAACCGGTTTTAGAGCGTA
AAAATGTTACTGGATATAAATATACTGAAAAAGGTAAAGATTATATAGATGTTATAGTAGACAATCAATATTCTCAAATT
TCTTTAGTTGGATCTGATAAAGACAAATTTAAAGATGGAGACAACTCGAATATAGATGTGTTTATCCTTAGAGAAGGTGA
CAGTAGACAAGCAACAAATTACTCAATTGGTGGCGTAACAAAAACAAACAGTCAACCTTTTATTGACTATATACACACAC
CAATCCTTGAAATCAAGAAAGGTAAAGAAGAACCACAAAGTAGTTTATACCAAATTTATAAAGAAGACATCTCATTGAAA
GAACTTGATTATAGATTAAGAGAACGTGCAATCAAACAACACGGCTTGTATTCAAATGGTCTTAAACAAGGTCAAATTAC
AATTACAATGAAAGATGGCAAATCACATACTATCGATTTAAGTCAAAAACTTGAAAAAGAACGTATGGGTGATTCTATCG
ACGGCAGACAAATACAAAAAATTCTAGTAGAAATGAAATAA

Upstream 100 bases:

>100_bases
GGTTTAATTTGAAAGGGGATAGCGCCTCAATATAATGTAGGTAGATTGTTCATATTACGTAATTGAAAAATCAAATTTAA
ATAGATTGGGGCTAAAAATT

Downstream 100 bases:

>100_bases
TACTTTCTAACAACAAAGCGCTATGTTGAATAGTGCTTGTTATGGAAATATATGGAAGTTAAGCGACGTACTGTTGCTTA
GCTTCTTTTTTTGAGGGGAA

Product: superantigen-like protein

Products: NA

Alternate protein names: Exotoxin; Superantigen-Like; Exotoxin-Like Protein

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI
SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK

Sequences:

>Translated_226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI
SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK
>Mature_226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI
SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25691; Mature: 25691

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
YTEKGKDYIDVIVDNQYSQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVT
ECCCCCCEEEEEECCCCCEEEEEECCHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCEE
KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNG
ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
LKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK
CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
YTEKGKDYIDVIVDNQYSQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVT
ECCCCCCEEEEEECCCCCEEEEEECCHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCEE
KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNG
ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
LKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK
CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA