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The map label for this gene is 15925742

Identifier: 15925742

GI number: 15925742

Start: 42539

End: 42880

Strand: Direct

Name: 15925742

Synonym: SA0035

Alternate gene names: NA

Gene position: 42539-42880 (Clockwise)

Preceding gene: 15925738

Following gene: 29165616

Centisome position: 1.51

GC content: 30.12

Gene sequence:

>342_bases
ATTTATACAGGATCATTATACTTAAGTTTAATTTCGTTATTACAGAACCACACATTCCAACCAGAAGAGAAAGTATGTCT
ATTTAGTTATGGTTCAGGAGCAGTAGGAGAAATCTTTAGTGGTTCAATCGTTAAAGGATATGACAAAGCATTAGATAAAG
AGAAACACTTAAATATGCTAGAATCTAGAGAGCAATTATCAGTCGAAGAATACGAAACATTCTTTAACAGATTTGATAAT
CAAGAATTTGATTTCGAACGTGAATTGACACAAGATCCATATTCAAAAGTATACTTATACAGTATAGAAGACCATATCAG
AACATATAAGATAGAGAAATAA

Upstream 100 bases:

>100_bases
TATCTGAAATAGTTCATACAGAAGACTCCTTTTTGTTAAAATTATACTATAAATTCAACTTTGCAACAGAACCGTATTAT
GGAATAGAGATGTTGGTAAC

Downstream 100 bases:

>100_bases
ACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTT
TTAAAGTTTACAGTGATATG

Product: HMG-CoA synthase

Products: NA

Alternate protein names: 3-Hydroxy-3-Methylglutaryl CoA Synthase; 3-Hydroxy-3-Methylglutaryl Co A Synthase; 3-Hydroxy-3-Methylglutaryl CoA Synthetase; HMG-CoA Synthase; Hydroxy-3-Methylglutaryl Co A Synthase

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNMLESREQLSVEEYETFFNRFDN
QEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK

Sequences:

>Translated_113_residues
MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNMLESREQLSVEEYETFFNRFDN
QEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK
>Mature_113_residues
MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNMLESREQLSVEEYETFFNRFDN
QEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK

Specific function: Unknown

COG id: COG3425

COG function: function code I; 3-hydroxy-3-methylglutaryl CoA synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13361; Mature: 13361

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNML
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCHHHHHHHH
ESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK
HHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MYTGSLYLSLISLLQNHTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNML
CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHCCHHHHHHHH
ESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK
HHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA