Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is treR [H]
Identifier: 15675854
GI number: 15675854
Start: 1754601
End: 1755314
Strand: Direct
Name: treR [H]
Synonym: SPy_2099
Alternate gene names: 15675854
Gene position: 1754601-1755314 (Clockwise)
Preceding gene: 15675850
Following gene: 15675855
Centisome position: 94.72
GC content: 39.08
Gene sequence:
>714_bases ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA
Upstream 100 bases:
>100_bases AATTTGTCTACAAGTTGTTTGTGCCAAAAAAGCCATTATTTTGGTAAAATAAAAGGTGTTGTCTGTAAAAAAATAGACAA ATGGAAAGGTAATTTACCCT
Downstream 100 bases:
>100_bases AGACAGAAAAAAGCCTTGCAAAATGCAAGGCTTGCTTTTCTTTTTCTTGACTCTGAGTTTCCCCATTATCAACTGTGTTA TTGTAAGTGTGCACTTACTT
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK
Sequences:
>Translated_237_residues MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK >Mature_236_residues TKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELTS YQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIYQ YLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK
Specific function: Repressor for the trehalose operon (treP and treA). Binds trehalose-6-phosphate, which probably acts as an inducer [H]
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786950, Length=232, Percent_Identity=26.2931034482759, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1790118, Length=186, Percent_Identity=24.1935483870968, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000524 - InterPro: IPR012770 - InterPro: IPR011663 - InterPro: IPR011991 [H]
Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]
EC number: NA
Molecular weight: Translated: 27621; Mature: 27490
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQ CCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC GRGTQVIRHHQIMFPISELTSYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSL CCCCHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCH VWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIYQYLEKELHLAIDFALKEVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK HHHCCCCEEEEECCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQ CHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC GRGTQVIRHHQIMFPISELTSYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSL CCCCHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCH VWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIYQYLEKELHLAIDFALKEVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK HHHCCCCEEEEECCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8917076; 8969503; 9384377; 7651129; 8755887 [H]