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The map label for this gene is mrnC [H]

Identifier: 15675743

GI number: 15675743

Start: 1614376

End: 1614789

Strand: Reverse

Name: mrnC [H]

Synonym: SPy_1940

Alternate gene names: 15675743

Gene position: 1614789-1614376 (Counterclockwise)

Preceding gene: 15675744

Following gene: 15675742

Centisome position: 87.17

GC content: 39.86

Gene sequence:

>414_bases
GTGACTAATCCAGTTGATGTGAATTTGATTAATGGCATTGCCCTAGCCTTTGAAGGGGATGCGGTTTATTCCTACTATGT
TCGTCGTCATCTCATTTTTCAAGGTAAAACGAAACCTAGCCAGCTACACCGTTTAGCAACGAGATATGTTTCTGCTAAGG
CACAAGCCAACTTGATTCAGGCTATGTTAGAAGCGCAGCTATTGACCGAAAAAGAAGAAGACATCTATAAGCGTGGTCGC
AATACCAATAGCCATACTAAAGCTAAGAATGCCGATATTATTACCTATCGTATGTCGACAGGTTTTGAAGCCATTATGGG
TTATCTTGATATGATGGGCCAAAAAGAGCGGTTAGAAGAATTGATCAGATGGTGTATTGAGTATGTAGAAAAGCAACAAT
TGATATCCTCATAA

Upstream 100 bases:

>100_bases
CGCGCGAATCGTGATTTTGCCACAGCTGATGCCATTCGAGATCAGTTAGCAGTTCAAGGCATCAAGCTGCTAGATACCAA
AGATGGTGTGAGGTGGCTGC

Downstream 100 bases:

>100_bases
GAGTCCCCTAGGAGACTCTTATTTTCATAGGTCTGAAGTAAAGGTAGAGAGCCATTAAGTCTTTTTATGACATCAAAAAG
ACATAATGATATAAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTNPVDVNLINGIALAFEGDAVYSYYVRRHLIFQGKTKPSQLHRLATRYVSAKAQANLIQAMLEAQLLTEKEEDIYKRGR
NTNSHTKAKNADIITYRMSTGFEAIMGYLDMMGQKERLEELIRWCIEYVEKQQLISS

Sequences:

>Translated_137_residues
MTNPVDVNLINGIALAFEGDAVYSYYVRRHLIFQGKTKPSQLHRLATRYVSAKAQANLIQAMLEAQLLTEKEEDIYKRGR
NTNSHTKAKNADIITYRMSTGFEAIMGYLDMMGQKERLEELIRWCIEYVEKQQLISS
>Mature_136_residues
TNPVDVNLINGIALAFEGDAVYSYYVRRHLIFQGKTKPSQLHRLATRYVSAKAQANLIQAMLEAQLLTEKEEDIYKRGRN
TNSHTKAKNADIITYRMSTGFEAIMGYLDMMGQKERLEELIRWCIEYVEKQQLISS

Specific function: Might be an RNase involved in RNA processing [H]

COG id: COG1939

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000999
- InterPro:   IPR008226 [H]

Pfam domain/function: PF00636 Ribonuclease_3 [H]

EC number: NA

Molecular weight: Translated: 15807; Mature: 15676

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPVDVNLINGIALAFEGDAVYSYYVRRHLIFQGKTKPSQLHRLATRYVSAKAQANLIQ
CCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AMLEAQLLTEKEEDIYKRGRNTNSHTKAKNADIITYRMSTGFEAIMGYLDMMGQKERLEE
HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH
LIRWCIEYVEKQQLISS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNPVDVNLINGIALAFEGDAVYSYYVRRHLIFQGKTKPSQLHRLATRYVSAKAQANLIQ
CCCCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AMLEAQLLTEKEEDIYKRGRNTNSHTKAKNADIITYRMSTGFEAIMGYLDMMGQKERLEE
HHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH
LIRWCIEYVEKQQLISS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]