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The map label for this gene is yacP [H]

Identifier: 15675740

GI number: 15675740

Start: 1612068

End: 1612586

Strand: Reverse

Name: yacP [H]

Synonym: SPy_1937

Alternate gene names: 15675740

Gene position: 1612586-1612068 (Counterclockwise)

Preceding gene: 15675741

Following gene: 15675739

Centisome position: 87.05

GC content: 36.42

Gene sequence:

>519_bases
ATGAAAAAACGGATATTATTAGTAGATGGGTATAATATGATTGCCTTTTGGCAATCAACCCGTCAGTTGTTTAAGACAAA
TCAGCTTGATCAGGCACGTAACACACTTTTAACAAAACTTAATCATTATGCCCATTTTGAGAATATTAATATTATTTGTG
TTTTTGATGCCCAATATGTACCGGGGTTAAGGCAACGATATGACCAGTATTATATCTCAGTGGTATTTACAGAGGAAGAC
GAAACAGCAGATAGCTACATTGAGCGCATGGCAGCAGAGTTAAATACGGCTATACATATGGTAGAAGTAGCTACGAGTGA
TTTAAATGAACAATGGACGATTTTTTCTCAAGGAGCTCTTCGTGTCACTGCAAGAGAATTAGAGCAAAGAGTTCATACTG
TCAAAGCTGATTTAGATAAAATGTCTAGAGATATTGATCTCAAAACGCCTAAACTGCGGCCTTTTGACCAAGGACAGCTT
ATTCAATTGAAGGATTTTATGTCTCAGTTAGATCGATAA

Upstream 100 bases:

>100_bases
AATGATTACGATTCCTATGAATGGTCACGTACAGAGCTTAAATGCTAGCGTAGCGGCAGCTATTCTCATGTATGAAGTTT
TCCGAAATAGGCGCTAAATT

Downstream 100 bases:

>100_bases
TGAGAATTACGACTCGCCAAGTGCGGGTTTTTTTGATAAAATAAAACAATAATTATTTGATTATCAAACTAAAAAACTGG
ATGAGGAGAAGTAAGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLRQRYDQYYISVVFTEED
ETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGALRVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQL
IQLKDFMSQLDR

Sequences:

>Translated_172_residues
MKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLRQRYDQYYISVVFTEED
ETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGALRVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQL
IQLKDFMSQLDR
>Mature_172_residues
MKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLRQRYDQYYISVVFTEED
ETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGALRVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQL
IQLKDFMSQLDR

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20254; Mature: 20254

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYV
CCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCC
PGLRQRYDQYYISVVFTEEDETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGAL
CHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE
RVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQLIQLKDFMSQLDR
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MKKRILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYV
CCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCC
PGLRQRYDQYYISVVFTEEDETADSYIERMAAELNTAIHMVEVATSDLNEQWTIFSQGAL
CHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE
RVTARELEQRVHTVKADLDKMSRDIDLKTPKLRPFDQGQLIQLKDFMSQLDR
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]