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The map label for this gene is gatC

Identifier: 15675616

GI number: 15675616

Start: 1467057

End: 1467359

Strand: Reverse

Name: gatC

Synonym: SPy_1772

Alternate gene names: 15675616

Gene position: 1467359-1467057 (Counterclockwise)

Preceding gene: 15675617

Following gene: 15675615

Centisome position: 79.21

GC content: 39.6

Gene sequence:

>303_bases
ATGAAAATTTCTGAAGAAGAAGTTCGCCATGTCGCGAAGCTATCAAAATTATCATTTTCAGAAAGTGAGACAACAACCTT
TGCAACGACCTTATCCAAAATCGTTGATATGGTTGAATTGCTGAACGAAGTTGATACCGAAGGTGTCGCCATTACAACAA
CCATGGCAGATAAGAAAAATGTGATGCGTCAAGATGTCGCTGAAGAAGGAACAGACCGTGCCTTGCTCTTTAAAAATGTT
CCTGAAAAAGAAAATCACTTTATCAAGGTACCTGCTATTTTGGATGACGGAGGAGATGCCTAA

Upstream 100 bases:

>100_bases
ATGTAAAAATGATGTGAGGAGTTTTTCCGCTACCTTTGGAGAATAGCAGGGCTGTTCTTTGGAATTGGAATACTTCTGAT
CATCTTGGATGGGAGAAATC

Downstream 100 bases:

>100_bases
TGTCTTTTAATCATAAAACCATTGAAGAGTTGCATGACCTCCTTGTAGCTAAGGAGATTTCAGCAACAGAATTGACCCAA
GCAACACTTGAAGACATCAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKISEEEVRHVAKLSKLSFSESETTTFATTLSKIVDMVELLNEVDTEGVAITTTMADKKNVMRQDVAEEGTDRALLFKNV
PEKENHFIKVPAILDDGGDA

Sequences:

>Translated_100_residues
MKISEEEVRHVAKLSKLSFSESETTTFATTLSKIVDMVELLNEVDTEGVAITTTMADKKNVMRQDVAEEGTDRALLFKNV
PEKENHFIKVPAILDDGGDA
>Mature_100_residues
MKISEEEVRHVAKLSKLSFSESETTTFATTLSKIVDMVELLNEVDTEGVAITTTMADKKNVMRQDVAEEGTDRALLFKNV
PEKENHFIKVPAILDDGGDA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_STRP1 (P68890)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_269790.1
- RefSeq:   YP_282871.1
- ProteinModelPortal:   P68890
- SMR:   P68890
- EnsemblBacteria:   EBSTRT00000001035
- EnsemblBacteria:   EBSTRT00000027537
- GeneID:   3571392
- GeneID:   902007
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_1772
- KEGG:   spz:M5005_Spy_1508
- GeneTree:   EBGT00050000027919
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   PRK00034
- BioCyc:   SPYO160490:SPY1772-MONOMER
- BioCyc:   SPYO293653:M5005_SPY1508-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11070; Mature: 11070

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISEEEVRHVAKLSKLSFSESETTTFATTLSKIVDMVELLNEVDTEGVAITTTMADKKN
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHH
VMRQDVAEEGTDRALLFKNVPEKENHFIKVPAILDDGGDA
HHHHHHHHCCCCCEEEECCCCCCCCCEEEECEEECCCCCC
>Mature Secondary Structure
MKISEEEVRHVAKLSKLSFSESETTTFATTLSKIVDMVELLNEVDTEGVAITTTMADKKN
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHH
VMRQDVAEEGTDRALLFKNVPEKENHFIKVPAILDDGGDA
HHHHHHHHCCCCCEEEECCCCCCCCCEEEECEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296