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The map label for this gene is ynbA [H]

Identifier: 15674942

GI number: 15674942

Start: 765195

End: 766433

Strand: Direct

Name: ynbA [H]

Synonym: SPy_0922

Alternate gene names: 15674942

Gene position: 765195-766433 (Clockwise)

Preceding gene: 15674941

Following gene: 15674943

Centisome position: 41.31

GC content: 39.63

Gene sequence:

>1239_bases
ATGATTGAGACAAAGCGTCAGCAAGAAAGAGTGATTCTTTTAGGAGTTGAGCTTCAGACAACAGAACATTTTGACATGTC
CATGACAGAATTAGCTAATCTTGCCAAAACAGCTGGTGTCAAAGTTATGGCAAGTTTCAGCCAAAAACGAGAACGTTACG
ACAGCAAAACCTTTATCGGCTCAGGGAAACTGGATGAGATTAAGGCGATTGTGGAAGCTGATGAGATTGATGCAGTTATT
GTGAACAATCGGTTGACTGCTAGGCAAAATGCTAATCTAGAAGCTGTTTTAGAGGTAAAAGTCATTGACCGTATGCAGTT
AATCTTAGATATTTTTGCCATGCGTGCCAGAAGCCATGAGGGCAAATTACAAGTACACCTTGCCCAATTGAAATATATGT
TACCTCGTTTGGTTGGACAGGGCATCATGTTAAGTCGTCAAGCAGGTGGTATTGGGAGCCGTGGACCAGGTGAAAGCCAA
CTAGAGTTAAATCGCCGTTCGATTCGTCATCAGATTGCTGATATTGAACGCCAATTAACTCAGGTAGAGAAAAATCGTCA
AACAATTAGAGATCGTCGTGTGGGTTCAGATACCTTTAAAATTGGCTTGATTGGCTACACCAATGCTGGCAAGTCAACCA
TTATGAACTTGTTGACAGATGACAGCCACTATGAAGCCAATGAATTATTTGCTACCTTAGATGCAACTACAAAGCAACTC
TATTTAGAAAATCAATTTCAAGCAACCTTAACAGACACCGTAGGCTTTATTCAAGACTTGCCAACGGAATTAGTGGCTGC
TTTTAAATCAACCCTAGAAGAAAGCAAATATGTGGATTTGCTGTTACATGTGATTGATGCGAGTGATCCCAATCATAGTG
AGCAAGAAAAAGTGGTTTTAAACCTTCTAAAAGAGCTAGACATGCTTAATATTCCGCGTTTAGCTATTTATAACAAGGTG
GATATAGCAGAACAATTCACAGCTACTGCTTTTCCAAATATCAGGATTTCAGCCCGTTCAAAGGATAGCAAAATTCTCTT
GAGACGTTTAATCATTGACCAAATTCGAGACCAGTTTGTTCCTTTTAGAATCAAAGTGCATCAAGACAAGGCGTACAAGC
TATATGATTTGAATCGAGTTGCTCTTTTAGACCACTACACGTTTGACCAAGAAATAGAGGATATTTCGGGCTACATTTCC
CCAAAACAGCAATGGAGACTTGACGATTTTTATGAATAA

Upstream 100 bases:

>100_bases
TTTTCTTGGTCAGAAAGAGAAGTCATGACGCAAAATTAGCAGAATCTGTTGAAGATATGTTATAATAGAATTTACGGAAT
TTGGAGGATTGGTAAAGGTG

Downstream 100 bases:

>100_bases
TTATATTGATTTAGCAAAAACCTATGGTGGATTTACTAGTCTGGATACCAACTACCTAAACCATCTGTTAGCCAGTTTGA
CAGACCAGCAAAAACTAGCT

Product: putative GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI
VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL
YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV
DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS
PKQQWRLDDFYE

Sequences:

>Translated_412_residues
MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI
VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL
YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV
DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS
PKQQWRLDDFYE
>Mature_412_residues
MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIGSGKLDEIKAIVEADEIDAVI
VNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
LELNRRSIRHQIADIERQLTQVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL
YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVLNLLKELDMLNIPRLAIYNKV
DIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFVPFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYIS
PKQQWRLDDFYE

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=193, Percent_Identity=36.2694300518135, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI310133118, Length=193, Percent_Identity=36.2694300518135, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI310124269, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI310124267, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI310124171, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI310124169, Length=185, Percent_Identity=36.2162162162162, Blast_Score=113, Evalue=4e-25,
Organism=Escherichia coli, GI1790615, Length=333, Percent_Identity=44.1441441441441, Blast_Score=265, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI17561038, Length=308, Percent_Identity=29.8701298701299, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24650079, Length=309, Percent_Identity=31.7152103559871, Blast_Score=129, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 47184; Mature: 47184

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIG
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEC
SGKLDEIKAIVEADEIDAVIVNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHE
CCCHHHHHHHHHHCCCCEEEECCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC
GKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQLELNRRSIRHQIADIERQLT
CEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL
HHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NLLKELDMLNIPRLAIYNKVDIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFV
HHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC
PFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYISPKQQWRLDDFYE
CEEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MIETKRQQERVILLGVELQTTEHFDMSMTELANLAKTAGVKVMASFSQKRERYDSKTFIG
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEC
SGKLDEIKAIVEADEIDAVIVNNRLTARQNANLEAVLEVKVIDRMQLILDIFAMRARSHE
CCCHHHHHHHHHHCCCCEEEECCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCC
GKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQLELNRRSIRHQIADIERQLT
CEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QVEKNRQTIRDRRVGSDTFKIGLIGYTNAGKSTIMNLLTDDSHYEANELFATLDATTKQL
HHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
YLENQFQATLTDTVGFIQDLPTELVAAFKSTLEESKYVDLLLHVIDASDPNHSEQEKVVL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NLLKELDMLNIPRLAIYNKVDIAEQFTATAFPNIRISARSKDSKILLRRLIIDQIRDQFV
HHHHHCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC
PFRIKVHQDKAYKLYDLNRVALLDHYTFDQEIEDISGYISPKQQWRLDDFYE
CEEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]