Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is parE [H]
Identifier: 15674930
GI number: 15674930
Start: 752349
End: 754301
Strand: Direct
Name: parE [H]
Synonym: SPy_0909
Alternate gene names: 15674930
Gene position: 752349-754301 (Clockwise)
Preceding gene: 15674928
Following gene: 15674931
Centisome position: 40.61
GC content: 41.68
Gene sequence:
>1953_bases GTGTTGACTAAGAAAGAAATTACAATTAATAATTATAATGACGATGCTATCCAAGTCCTAGAAGGGTTAGATGCTGTTCG CAAGCGTCCAGGGATGTATATCGGTTCAACAGATGCTACGGGATTGCACCACCTGATTTGGGAAATTGTTGATAATGCTG TCGATGAGGCCTTGTCTGGTTTTGGAGATGATATTAAGGTTGTTATCAATAAAGATGGCTCGGTCAGTGTGGCAGATAGC GGACGTGGAATGCCAACAGGCCAGCATGCCATGGGGATTCCCACCGTTCAAGTTATTTTTACGATTCTTCATGCAGGTGG TAAATTTGGTCAGGGTGGCTACAAAACGTCAGGTGGTTTGCACGGTGTTGGCTCCTCTGTTGTCAATGCTTTGTCTGCCT GGTTAGAAGTCGAAATCACAAGAGACGGGTCAGTGTATCGTCAGCGCTTTGAAAATGGTGGGAAACCTGTTACAACCCTT AAAAAAGTTGGCACAGCTCCTAAGTCTAAATCAGGAACGGTTGTAACCTTTATGCCTGATGATAAGATTTTTTCAACTAT TGACTTTAAGTTCAATACCATTTCAGAACGATTGAAAGAATCTGCTTTTCTTTTGAAAAATGTCAAGATGAGCTTGACAG ATCTTCGTGGAGATGACCCGATTATTGAAGAGTTTCATTATGAAAATGGGGTTCAAGATTTCGTCGAATACCTCAATGAA GATAAGGAAACCTTGACACCTGTTATTTACATGGAAGGTCAAGACCAAGACTTTCAAGTCGAGGTTGCTTTGCAGTATAA CGATGGTTTCTCCGACAATATCTTATCCTTTGTAAACAATGTGCGCACCAAAGATGGTGGAAGCCATGAAACGGGACTAA AGTCAGCTATTACCAAAGCGATGAATGACTATGCTCGTAAAACCAATCTCTTAAAAGAAAAGGATAAAAATCTAGAGGGC TCAGATTATCGAGAAGGACTCTCAGCAGTATTATCTATCTTAGTTCCTGAGCAGCACTTGCAATTTGAAGGACAGACCAA AGACAAATTGGGAAGTCCCTTAGCTAGACCTATTGTAGAGAGCATTGTTTCTGAAAAATTAACCTTCTTTTTACTCGAAA ATGGAGAAGTAGCTTCTCATCTAGTTCGCAAAGCCATTAAAGCTAGAGATGCTCGCGAAGCTGCTCGAAAAGCGCGTGAT GACTCACGTAATGGTAAGAAAAACAAAAAAGACAAAGGCTTGTTGTCGGGAAAACTAACCCCAGCTCAGTCCAAAAATGC CAAGAAAAATGAATTGTATCTGGTCGAAGGAGATTCTGCGGGAGGTTCAGCCAAACAAGGACGAGACCGCAAATTTCAGG CTATTTTACCATTACGTGGCAAAGTTTTAAATACCGAAAAAGCTAAGATGGCTGACATCTTGAAAAATGAAGAAATTAAC ACTATGGTTTATACCATTGGAGCTGGAGTGGGAGCTGACTTTAACCTCGAGGATATCAACTATGATAAGATTATTATCAT GACCGATGCTGATACCGATGGGGCTCATATTCAGACTCTTTTGCTGACTTTCTTTTACCGTTATATGCGACCGTTGGTGG AAGCAGGTCACGTTTATATTGCGCTTCCCCCGCTTTACAAAATGTCAAAAGGTAAAGGCAAAACTGAAAAAATTGCTTAT GCTTGGACTGATGGTGAATTGGAAGATCTGCGCAGAGAATTTGGCAAGGGGGCTATTCTTCAACGCTATAAAGGACTGGG TGAAATGAATGCTAACCAATTATGGGAAACCACTATGGACCCTGAAACCAGAACCCTTATTCGTGTTACTATTGACGACT TGGCAAGAGCAGAGCGACGTGTTTCTGTGTTGATGGGTGACAAAGCAGCCCCACGCCGTCAGTGGATCGAGGATAACGTC AAGTTTACCTTAGAAGAAAATACGGTGTTTTAG
Upstream 100 bases:
>100_bases GAACTAGATCTGGAAAAGAATTCGGAAAAAATTAGCAAATTATTTTGCAAAATTGGTAAAAAACTTGTAAGATAAAAAAG ATGAAACTGTCTGGAGGTCG
Downstream 100 bases:
>100_bases TCATACAAGTTTCTCACAGATAATTACAAGTGCTAAAGACGATTGTTTTTTAGGTAATTAATAAATAATGAAAAAGAAAG CTATTTGAATATGTCAAACA
Product: DNA topoisomerase IV subunit B
Products: NA
Alternate protein names: Topoisomerase IV subunit B [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVDNAVDEALSGFGDDIKVVINKDGSVSVADS GRGMPTGQHAMGIPTVQVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSAWLEVEITRDGSVYRQRFENGGKPVTTL KKVGTAPKSKSGTVVTFMPDDKIFSTIDFKFNTISERLKESAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNE DKETLTPVIYMEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKAMNDYARKTNLLKEKDKNLEG SDYREGLSAVLSILVPEQHLQFEGQTKDKLGSPLARPIVESIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARD DSRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEIN TMVYTIGAGVGADFNLEDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKTEKIAY AWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMDPETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNV KFTLEENTVF
Sequences:
>Translated_650_residues MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVDNAVDEALSGFGDDIKVVINKDGSVSVADS GRGMPTGQHAMGIPTVQVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSAWLEVEITRDGSVYRQRFENGGKPVTTL KKVGTAPKSKSGTVVTFMPDDKIFSTIDFKFNTISERLKESAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNE DKETLTPVIYMEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKAMNDYARKTNLLKEKDKNLEG SDYREGLSAVLSILVPEQHLQFEGQTKDKLGSPLARPIVESIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARD DSRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEIN TMVYTIGAGVGADFNLEDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKTEKIAY AWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMDPETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNV KFTLEENTVF >Mature_650_residues MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVDNAVDEALSGFGDDIKVVINKDGSVSVADS GRGMPTGQHAMGIPTVQVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSAWLEVEITRDGSVYRQRFENGGKPVTTL KKVGTAPKSKSGTVVTFMPDDKIFSTIDFKFNTISERLKESAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNE DKETLTPVIYMEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKAMNDYARKTNLLKEKDKNLEG SDYREGLSAVLSILVPEQHLQFEGQTKDKLGSPLARPIVESIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARD DSRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEIN TMVYTIGAGVGADFNLEDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKTEKIAY AWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMDPETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNV KFTLEENTVF
Specific function: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule [H]
COG id: COG0187
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Homo sapiens, GI19913408, Length=636, Percent_Identity=25, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI19913406, Length=614, Percent_Identity=24.7557003257329, Blast_Score=112, Evalue=1e-24, Organism=Escherichia coli, GI48994957, Length=548, Percent_Identity=50.9124087591241, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1789408, Length=637, Percent_Identity=40.3453689167975, Blast_Score=422, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17535065, Length=638, Percent_Identity=26.0188087774295, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI212645845, Length=592, Percent_Identity=25.6756756756757, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI212645657, Length=183, Percent_Identity=28.4153005464481, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324241, Length=641, Percent_Identity=25.585023400936, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI17136538, Length=677, Percent_Identity=26.2924667651403, Blast_Score=126, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR001241 - InterPro: IPR013759 - InterPro: IPR002288 - InterPro: IPR013506 - InterPro: IPR013760 - InterPro: IPR018522 - InterPro: IPR005740 - InterPro: IPR006171 [H]
Pfam domain/function: PF00204 DNA_gyraseB; PF00986 DNA_gyraseB_C; PF02518 HATPase_c; PF01751 Toprim [H]
EC number: 5.99.1.-
Molecular weight: Translated: 72185; Mature: 72185
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00177 TOPOISOMERASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVDNAVDEALSG CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHC FGDDIKVVINKDGSVSVADSGRGMPTGQHAMGIPTVQVIFTILHAGGKFGQGGYKTSGGL CCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC HGVGSSVVNALSAWLEVEITRDGSVYRQRFENGGKPVTTLKKVGTAPKSKSGTVVTFMPD CCCHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCC DKIFSTIDFKFNTISERLKESAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCC DKETLTPVIYMEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKA CHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPEQHLQFEGQTKDKLGSPLARPIVE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCHHHHHHHH SIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARDDSRNGKKNKKDKGLLSGKLT HHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PAQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEIN CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHCCCCCC TMVYTIGAGVGADFNLEDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYI EEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE ALPPLYKMSKGKGKTEKIAYAWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMD EECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCC PETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNVKFTLEENTVF CCCEEEEEEEHHHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVDNAVDEALSG CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHC FGDDIKVVINKDGSVSVADSGRGMPTGQHAMGIPTVQVIFTILHAGGKFGQGGYKTSGGL CCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC HGVGSSVVNALSAWLEVEITRDGSVYRQRFENGGKPVTTLKKVGTAPKSKSGTVVTFMPD CCCHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCC DKIFSTIDFKFNTISERLKESAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCC DKETLTPVIYMEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKA CHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPEQHLQFEGQTKDKLGSPLARPIVE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCHHHHHHHH SIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARDDSRNGKKNKKDKGLLSGKLT HHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PAQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEIN CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHCCCCCC TMVYTIGAGVGADFNLEDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYI EEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE ALPPLYKMSKGKGKTEKIAYAWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMD EECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCC PETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNVKFTLEENTVF CCCEEEEEEEHHHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8763932; 11463916; 8891124 [H]