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The map label for this gene is yvoA [H]

Identifier: 15674773

GI number: 15674773

Start: 573734

End: 574456

Strand: Direct

Name: yvoA [H]

Synonym: SPy_0715

Alternate gene names: 15674773

Gene position: 573734-574456 (Clockwise)

Preceding gene: 15674772

Following gene: 15674774

Centisome position: 30.97

GC content: 38.04

Gene sequence:

>723_bases
ATGCCAAAAGAACAACCACTCTATCTACAGATTGTTGATGACTTGGAAGTGAAAATCAAAAAAAGCATGACAGAAAACGA
TAAGTTGTTGTCAGAACGAGAATTAAGTGACCTTTACGGTGTTAGTCGTATCACGATTAGACTGACTCTTAAGGAATTGG
AATTACGAGACTTAATTTATAAAAAGCAGGGCAAGGGGACTTATGTTTCAGGAATCAAAGAACCTGCCACTGATTTATCA
AGTACTTACAGCTTTACAGAGCAGATGAAAAAAATGGGGAAAACTCCTAAAACAGAGATTCTTTCTTTTGAACAGTATCA
GGTAACACCTTACTTGTCTGGTCTCTTAGAGCTTGATCCCGATACAGAAGTTTTTGAATTAGAACGCCTAAGGATTGCAG
ATGATATGCCCTTGATGTTTGAACGATCCTATATTCCTGCTCAGCCTTTTCAGGGGTTAAGCATTGCGGACTTAAAGCGT
AAAGCTTTGTACGATATCTTTGCAAAGGACTATCAAGAAACAATCCGTCTTGCAGAAGAAGAGTTTTATGCCAGCATTGC
CTTGGACTATGAAGCAGGTCTCTTAGGCATTAAAAAGGGAGATCCTGTCTTACATATTATTCGTAAAACTTATAATGATA
AAAATATCTTAATTGAATTGACTTTCAGCATTGCAAGGGCGGATCAGTTTAGGTACCGGGTGCAACATCACCCTAATGGT
TAA

Upstream 100 bases:

>100_bases
TTGTGGAGTAAAAAAATTTAATAATTCTCAACATTAATTTGACGGACACTTATGATTATAATATACTTTAAGTGGTTATA
ACAAGTTAGAGGTGAATAAG

Downstream 100 bases:

>100_bases
GGAATTGGAGGTTAGGACATGTTTACAAAAACGCAGGAAGCTTTGGAGGCTCTTGGTGCAGCTATCACTACCAAGGAAAT
TAAACAAGAACCCCGTTTAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTLKELELRDLIYKKQGKGTYVSGIKEPATDLS
STYSFTEQMKKMGKTPKTEILSFEQYQVTPYLSGLLELDPDTEVFELERLRIADDMPLMFERSYIPAQPFQGLSIADLKR
KALYDIFAKDYQETIRLAEEEFYASIALDYEAGLLGIKKGDPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG

Sequences:

>Translated_240_residues
MPKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTLKELELRDLIYKKQGKGTYVSGIKEPATDLS
STYSFTEQMKKMGKTPKTEILSFEQYQVTPYLSGLLELDPDTEVFELERLRIADDMPLMFERSYIPAQPFQGLSIADLKR
KALYDIFAKDYQETIRLAEEEFYASIALDYEAGLLGIKKGDPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG
>Mature_239_residues
PKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTLKELELRDLIYKKQGKGTYVSGIKEPATDLSS
TYSFTEQMKKMGKTPKTEILSFEQYQVTPYLSGLLELDPDTEVFELERLRIADDMPLMFERSYIPAQPFQGLSIADLKRK
ALYDIFAKDYQETIRLAEEEFYASIALDYEAGLLGIKKGDPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=203, Percent_Identity=27.0935960591133, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790118, Length=232, Percent_Identity=25, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786950, Length=229, Percent_Identity=24.4541484716157, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082252, Length=197, Percent_Identity=25.8883248730964, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27845; Mature: 27714

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTLKELELRDLIY
CCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHH
KKQGKGTYVSGIKEPATDLSSTYSFTEQMKKMGKTPKTEILSFEQYQVTPYLSGLLELDP
HCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECHHEEECHHHHHHEECCC
DTEVFELERLRIADDMPLMFERSYIPAQPFQGLSIADLKRKALYDIFAKDYQETIRLAEE
CCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFYASIALDYEAGLLGIKKGDPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG
HHHEEEEEEECCCEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHEEEECCCCC
>Mature Secondary Structure 
PKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTLKELELRDLIY
CCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHH
KKQGKGTYVSGIKEPATDLSSTYSFTEQMKKMGKTPKTEILSFEQYQVTPYLSGLLELDP
HCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECHHEEECHHHHHHEECCC
DTEVFELERLRIADDMPLMFERSYIPAQPFQGLSIADLKRKALYDIFAKDYQETIRLAEE
CCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFYASIALDYEAGLLGIKKGDPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG
HHHEEEEEEECCCEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]