Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ybdN [H]
Identifier: 15674394
GI number: 15674394
Start: 176004
End: 177338
Strand: Direct
Name: ybdN [H]
Synonym: SPy_0189
Alternate gene names: 15674394
Gene position: 176004-177338 (Clockwise)
Preceding gene: 15674393
Following gene: 15674395
Centisome position: 9.5
GC content: 31.69
Gene sequence:
>1335_bases GTGAAAAAGTATTTAAATCAAAATGTTTATGATGCATTGATAGAAAGATTACATTTTTTGTTTAATGATTTTCCTATTGT CTATATTTCCTTCTCAGGTGGAAAAGATAGTGGGTTACTTCTTAATATTTTACTGGATTTTAGAGATAAATATTATCCGG ATAGAGAAATAGGTGTGTTTCATCAAGATTTTGAAGCACAGTACAGTTTAACAACAAAATATGTTCAAGAAACATTCACT TCTTTAGAAGGTAGAAAAAAAGTTTCTTTGTATTGGGTGTGCTTACCGATGGCTACTAGAACTGCACTTAGTAGTTATGA AATGTTTTGGTATCCGTGGGATGACAAAACAGAAGATATCTGGGTAAGACCAATGCCATCTCAAGATTATGTTATTAATT TGGAAAATAATTCAATTACTACTTATCGTTATAAAATGAATCAGGAGGATTTAGCGAAACAATTTGGTAGGTGGTATAAA CAAATTCACGGAAATCAAAAAACAGTTTGTATATTAGGAAACCGTGCTTCAGAATCCTTACACAGATATAGTGGTTTTAT CAATAAAAAGTATGGTTATCAAAAGGAATGCTGGATTACCAAACAATTCAAAGATGTCTGGACAGCATCTCCCTTATATG ATTGGTCAGTGGAAGACATATGGCATGCTTACTATAAGTTTTCTTATTCTTATAACGAACTTTATGATCTATTTTATAAA GCGGGTTTAAAACCATCACAAATGAGAGTTGCATCTCCTTTTCAAGACTATGCTGTTGATAGCCTAAATCTTTATAGAAT AATAGATCAAGAAACTTGGGTAAAGCTTTTGGGACGTGTTCAAGGAGTTAACTTTTCGAATATTTATGGACGTACTAAAG CAATGGGATATAAATCAATTGCTTTACCAAAGGGTCATTCGTGGAAGTCGTATACTCAGTTTCTTTTATCAACGCTACCA GTGAGGTTAAGAAATAATTATGTTAGAAAATTTAATAAATCAATAGACTTTTGGCATAAAACAGGCGGAGGACTTGCGGA GGAAACAATTAATGAACTAATTGAAAAAGGATATCGTATTGCTAGAAATGGTATTTCAAATTATACCTCTTTTAAACATT CAAGGGTTATTTTTTTAGATCAAATTCCTGATGATACAGACGATATTGTAACAACAAAGGATATACCAAGCTGGAAACGA ATGTGTTTCTGTATTTTAAAAAACGATCATATTTGTCGAACTATGGGGTTTGGTTTGACAAGAGAGCAACAAAAAATAGT AGCCTTTTTAAAAGAGAAATATAAGACGAGTTTAAAGGAGTTAGAAAGTGAGTAA
Upstream 100 bases:
>100_bases TAATTATTCAACTTGAAAAATTAAAAAACAAAAAGATCGAAAAAGAGATTCTTAGTGAATCTATGTATTAATATTTTTAA ATGCATAATGAGGAAGTTTA
Downstream 100 bases:
>100_bases TTTTATTAGTCCAGTCTATGAGATTAAATCAATTCCAATTGAAAAGATTTCTCCAAATGATTATAATCCGAATTCAGTTG CTCCGCCTGAAATGAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE
Sequences:
>Translated_444_residues MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE >Mature_444_residues MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVFHQDFEAQYSLTTKYVQETFT SLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDIWVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYK QIHGNQKTVCILGNRASESLHRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSYTQFLLSTLP VRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRIARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKR MCFCILKNDHICRTMGFGLTREQQKIVAFLKEKYKTSLKELESE
Specific function: Unknown
COG id: COG3969
COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786818, Length=424, Percent_Identity=29.9528301886792, Blast_Score=191, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021845 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]
EC number: NA
Molecular weight: Translated: 52678; Mature: 52678
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVF CCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCE HQDFEAQYSLTTKYVQETFTSLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDI ECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCEEEEECCCCCCCCE WVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYKQIHGNQKTVCILGNRASESL EEECCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH HRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK HHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSI CCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCEE ALPKGHSWKSYTQFLLSTLPVRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRI ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHH ARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKRMCFCILKNDHICRTMGFGLT HHHCCHHHHCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHEEEEECCCCEEHHHCCCCC REQQKIVAFLKEKYKTSLKELESE HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKYLNQNVYDALIERLHFLFNDFPIVYISFSGGKDSGLLLNILLDFRDKYYPDREIGVF CCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCE HQDFEAQYSLTTKYVQETFTSLEGRKKVSLYWVCLPMATRTALSSYEMFWYPWDDKTEDI ECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHCCCEEEEECCCCCCCCE WVRPMPSQDYVINLENNSITTYRYKMNQEDLAKQFGRWYKQIHGNQKTVCILGNRASESL EEECCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH HRYSGFINKKYGYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYK HHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH AGLKPSQMRVASPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSI CCCCCCCEEECCCHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHCCHHHHCCCCEE ALPKGHSWKSYTQFLLSTLPVRLRNNYVRKFNKSIDFWHKTGGGLAEETINELIEKGYRI ECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHH ARNGISNYTSFKHSRVIFLDQIPDDTDDIVTTKDIPSWKRMCFCILKNDHICRTMGFGLT HHHCCHHHHCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHEEEEECCCCEEHHHCCCCC REQQKIVAFLKEKYKTSLKELESE HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]