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The map label for this gene is acdS

Identifier: 13474939

GI number: 13474939

Start: 4798304

End: 4799317

Strand: Direct

Name: acdS

Synonym: mlr5932

Alternate gene names: 13474939

Gene position: 4798304-4799317 (Clockwise)

Preceding gene: 13474938

Following gene: 13474942

Centisome position: 68.2

GC content: 60.45

Gene sequence:

>1014_bases
ATGCTGGAAAAATTCGAGCGTTACCCGCTCACCTTTGGACTCACACCCATCGAGAAGCTCGACCGGCTCGGCAAGCATCT
GGGTGGCAAGGTCGAAATCTACGCCAAACGCGAGGACTGCAACTCCGGTCTGGCGTTCGGCGGCAACAAGCTGCGCAAGC
TCGAATACGTCATCCCCGACGCGATCGCGTCAGATGCCGATACCCTGGTCACCGTCGGCGGCGTGCAGTCCAACCACACG
CGCATGGTCGCCGCCGTCGCCGCCAAGATCGGCATGAAGTGTCTCCTGGTTCACGAGAGCTGGGTTCCACATGAGGATGT
CGTCTACGACCGGGTCGGCAACATTCTCTTGAGCCGCATCTTGGGCGCAGAGGTGCGTCTGGTCGACGATGGCTTTGACA
TCGGTATCCGCCGCAGCTGGGAAAAAGCGCTCTATGAGGTCAAGGCAAGGGGCGGCAGGCCCTATGCGATACCGGCCGGG
GCGTCTGTTCACCCGAATGGAGGCCTCGGCTATGTGGGGTTCGCGGAGGAAGTGCGCGCCCAGGAGGAACAGCTTGGGTT
TGCCTTCGACTACATGGTCGTTTGCACGGTCACCGGTTCAACGCATGCCGGCATGCTCGTCGGATTCGCCAAGGACGGTC
GGCAGCGCAACGTGATCGGTATCGATGCCTCTGCTACCCCGGCCAAGACCAAGGCGCAGGTGCTTAGCATTGCCCGACAT
ACGGCGACCCTCGTCGAGCTCGGATCGGAACTTGCCGAGGATGACGTGGTGTTGCTCGAGGACTACGCGCACCCGCGGTA
CGGCATTCCATCCGAGGAAACCAAGGAGGCGATCCGTCTGTGTGCGCGGCTCGAGGGTATGATTACCGATCCCGTCTATG
AGGGCAAATCGATGCAAGGGATGATTGACCTCGTTCAAAAAGGTTTTTTTCCAGCGGGCTCGAGGATACTTTACGCGCAT
CTCGGCGGCGCGCCGGCCATCAACGGTTATGGCTACACCTTTCGCAATGGCTGA

Upstream 100 bases:

>100_bases
TCTGATGGGTGGTCGGAGAGCGCGGCCGACAATCCAAGCAGCGCTTATGGAACGAGTTTTGCGTGGCTATTTCAGCTGAA
TGATCATCGCCGGAGAGAAT

Downstream 100 bases:

>100_bases
TGCTCGACAGATCTCCACGTGCCGTGCCTGCCGTAACAGCGCTGCGCCAAGTTTGACCGACGGCCTGTTGGCAAACTTCA
GCGGGCAGTTGTTAACTGCC

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: ACC deaminase; ACCD

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLEKFERYPLTFGLTPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPDAIASDADTLVTVGGVQSNHT
RMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRILGAEVRLVDDGFDIGIRRSWEKALYEVKARGGRPYAIPAG
ASVHPNGGLGYVGFAEEVRAQEEQLGFAFDYMVVCTVTGSTHAGMLVGFAKDGRQRNVIGIDASATPAKTKAQVLSIARH
TATLVELGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQGMIDLVQKGFFPAGSRILYAH
LGGAPAINGYGYTFRNG

Sequences:

>Translated_337_residues
MLEKFERYPLTFGLTPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPDAIASDADTLVTVGGVQSNHT
RMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRILGAEVRLVDDGFDIGIRRSWEKALYEVKARGGRPYAIPAG
ASVHPNGGLGYVGFAEEVRAQEEQLGFAFDYMVVCTVTGSTHAGMLVGFAKDGRQRNVIGIDASATPAKTKAQVLSIARH
TATLVELGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQGMIDLVQKGFFPAGSRILYAH
LGGAPAINGYGYTFRNG
>Mature_337_residues
MLEKFERYPLTFGLTPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPDAIASDADTLVTVGGVQSNHT
RMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRILGAEVRLVDDGFDIGIRRSWEKALYEVKARGGRPYAIPAG
ASVHPNGGLGYVGFAEEVRAQEEQLGFAFDYMVVCTVTGSTHAGMLVGFAKDGRQRNVIGIDASATPAKTKAQVLSIARH
TATLVELGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQGMIDLVQKGFFPAGSRILYAH
LGGAPAINGYGYTFRNG

Specific function: Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family

Homologues:

Organism=Escherichia coli, GI87082000, Length=329, Percent_Identity=38.6018237082067, Blast_Score=204, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 1A1D_RHILO (Q98AM7)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_106509.1
- ProteinModelPortal:   Q98AM7
- SMR:   Q98AM7
- GeneID:   1229168
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr5932
- NMPDR:   fig|266835.1.peg.4612
- HOGENOM:   HBG689308
- OMA:   DIGIRPS
- ProtClustDB:   PRK12390
- BRENDA:   3.5.99.7
- HAMAP:   MF_00807
- InterPro:   IPR005965
- InterPro:   IPR020601
- InterPro:   IPR001926
- TIGRFAMs:   TIGR01274

Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu

EC number: =3.5.99.7

Molecular weight: Translated: 36602; Mature: 36602

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKFERYPLTFGLTPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPD
CCCCHHCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHEEEEEECCH
AIASDADTLVTVGGVQSNHTRMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRI
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
LGAEVRLVDDGFDIGIRRSWEKALYEVKARGGRPYAIPAGASVHPNGGLGYVGFAEEVRA
HCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEECCCCCEEECCCHHHHHH
QEEQLGFAFDYMVVCTVTGSTHAGMLVGFAKDGRQRNVIGIDASATPAKTKAQVLSIARH
HHHHCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
TATLVELGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQG
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
MIDLVQKGFFPAGSRILYAHLGGAPAINGYGYTFRNG
HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCC
>Mature Secondary Structure
MLEKFERYPLTFGLTPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPD
CCCCHHCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHEEEEEECCH
AIASDADTLVTVGGVQSNHTRMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRI
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
LGAEVRLVDDGFDIGIRRSWEKALYEVKARGGRPYAIPAGASVHPNGGLGYVGFAEEVRA
HCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEECCCCCEEECCCHHHHHH
QEEQLGFAFDYMVVCTVTGSTHAGMLVGFAKDGRQRNVIGIDASATPAKTKAQVLSIARH
HHHHCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
TATLVELGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQG
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
MIDLVQKGFFPAGSRILYAHLGGAPAINGYGYTFRNG
HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968