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The map label for this gene is fdxB [H]

Identifier: 13474938

GI number: 13474938

Start: 4796319

End: 4796636

Strand: Direct

Name: fdxB [H]

Synonym: mlr5930

Alternate gene names: 13474938

Gene position: 4796319-4796636 (Clockwise)

Preceding gene: 13474937

Following gene: 13474939

Centisome position: 68.17

GC content: 60.06

Gene sequence:

>318_bases
ATGAGGAGCAAATTCATCAGCCGCGACGGCTCCATATGGGTGCCGGAATATCTGATCGCTATAGATGGCAAGATCTGCAT
CGGCTGCGGCCGCTGTTTCAAAGTCTGCTCGCGCGAGGTCATGCATCTTTACGGCGTCGATGACGCGGGTGAGATCCTCG
GCGCCTGCGACGGCGGTGACGACGATTTCGATGGTGAGCTCAATCGCATGATCATGGTTGTCGACCATGCCGGCCGCTGC
ATTGGCTGCGGAGCCTGCGGCCGCGTCTGCCCAAAGAACTGCCAGTCCCATCTCGCGGCCGACCAGATCGCAGCATGA

Upstream 100 bases:

>100_bases
TCAAATGGATTGAGATAGAGGAAGTCGCCGAGAAAACGCATGCCGCTTATGCCGAGTTGGATGGTGCCAGGAGAGAGCTT
GCCAAAATGAAGACTTTGCG

Downstream 100 bases:

>100_bases
GCTGCATGATTTGACGAGACAAAATCAGGAGAACGGCATGCGCTTCATCATCTTTTGTCGGCTCCTCGGGCTGGTCATGT
GCGGCAATGCTGTGGCGGTT

Product: ferredoxin 2[4Fe-4S] III, fdxB

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRSKFISRDGSIWVPEYLIAIDGKICIGCGRCFKVCSREVMHLYGVDDAGEILGACDGGDDDFDGELNRMIMVVDHAGRC
IGCGACGRVCPKNCQSHLAADQIAA

Sequences:

>Translated_105_residues
MRSKFISRDGSIWVPEYLIAIDGKICIGCGRCFKVCSREVMHLYGVDDAGEILGACDGGDDDFDGELNRMIMVVDHAGRC
IGCGACGRVCPKNCQSHLAADQIAA
>Mature_105_residues
MRSKFISRDGSIWVPEYLIAIDGKICIGCGRCFKVCSREVMHLYGVDDAGEILGACDGGDDDFDGELNRMIMVVDHAGRC
IGCGACGRVCPKNCQSHLAADQIAA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11272; Mature: 11272

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
9.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKFISRDGSIWVPEYLIAIDGKICIGCGRCFKVCSREVMHLYGVDDAGEILGACDGGD
CCCCCCCCCCCEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
DDFDGELNRMIMVVDHAGRCIGCGACGRVCPKNCQSHLAADQIAA
CCCCCCCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSKFISRDGSIWVPEYLIAIDGKICIGCGRCFKVCSREVMHLYGVDDAGEILGACDGGD
CCCCCCCCCCCEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCC
DDFDGELNRMIMVVDHAGRCIGCGACGRVCPKNCQSHLAADQIAA
CCCCCCCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]