| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474895
Identifier: 13474895
GI number: 13474895
Start: 4747298
End: 4747837
Strand: Direct
Name: 13474895
Synonym: mlr5878
Alternate gene names: NA
Gene position: 4747298-4747837 (Clockwise)
Preceding gene: 13474894
Following gene: 13474896
Centisome position: 67.47
GC content: 60.0
Gene sequence:
>540_bases ATGGGCCAGGCAAAAATCACCGAACTGCGCGACCGCGAGGCGATCCGCGACTGCCTTTATCGGTACTGCCGCGGCATAGA CCGCGCGGATGAGGCTGCGCTGCGCAGTGCATATTGGCCCGATGCGCATGACAATCACGGTGCCTATCGCGGCTCAGCCG AGGGCTTCTTTGAGTTTGCGCTTGGTCTCTTCAAAACCGGACCGCGCTTAATCCACCAGATCACGAACGTCTTGATCGAA TTCATCGACCCGTCGGAGGCCGTGGTCGAAAGCTATTTCACCGCGCTGCAACGCGGACCAGACAATGACGGAGAAGCACG CCAGGTGCTTCTCTGCGGCCGTTACTGCGATCTTTTTCAGAAGAGGGAAGGGGCGTGGCGCATTGCCGAACGGACCGTCG TTTACGATTGGCTCGAAGAGCAGACCCCACCAGCGGTCCCCGAGGCAGAACGGTTCGGCTTGCGGCAACCGATCGGAGCA GCGCATCCCAATGACCCGGTTTACGCGCTCAGGAAGCGCCGCAGCTCGTCATCAAAATGA
Upstream 100 bases:
>100_bases TTCGTCTCCGTTCTGGCTTCTTCAGTTGCCGATCGGTTCGACCTTGCACGCACCTAGAGGCACGAAACGCCTCTTCCAAT CTCAAATTTGCGACAGAGCG
Downstream 100 bases:
>100_bases AAATGCCATGCATGTCACCACAATGCTTTCCAAGGCTCCCAATTGCGGAGCCGCGTCGCGGGAGCGGTCGCGGAACGCAA CACGTCTACCCGGTATGGAA
Product: gamma-BHC dehydrochlorinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGQAKITELRDREAIRDCLYRYCRGIDRADEAALRSAYWPDAHDNHGAYRGSAEGFFEFALGLFKTGPRLIHQITNVLIE FIDPSEAVVESYFTALQRGPDNDGEARQVLLCGRYCDLFQKREGAWRIAERTVVYDWLEEQTPPAVPEAERFGLRQPIGA AHPNDPVYALRKRRSSSSK
Sequences:
>Translated_179_residues MGQAKITELRDREAIRDCLYRYCRGIDRADEAALRSAYWPDAHDNHGAYRGSAEGFFEFALGLFKTGPRLIHQITNVLIE FIDPSEAVVESYFTALQRGPDNDGEARQVLLCGRYCDLFQKREGAWRIAERTVVYDWLEEQTPPAVPEAERFGLRQPIGA AHPNDPVYALRKRRSSSSK >Mature_178_residues GQAKITELRDREAIRDCLYRYCRGIDRADEAALRSAYWPDAHDNHGAYRGSAEGFFEFALGLFKTGPRLIHQITNVLIEF IDPSEAVVESYFTALQRGPDNDGEARQVLLCGRYCDLFQKREGAWRIAERTVVYDWLEEQTPPAVPEAERFGLRQPIGAA HPNDPVYALRKRRSSSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20421; Mature: 20290
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAKITELRDREAIRDCLYRYCRGIDRADEAALRSAYWPDAHDNHGAYRGSAEGFFEFA CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LGLFKTGPRLIHQITNVLIEFIDPSEAVVESYFTALQRGPDNDGEARQVLLCGRYCDLFQ HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KREGAWRIAERTVVYDWLEEQTPPAVPEAERFGLRQPIGAAHPNDPVYALRKRRSSSSK HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure GQAKITELRDREAIRDCLYRYCRGIDRADEAALRSAYWPDAHDNHGAYRGSAEGFFEFA CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LGLFKTGPRLIHQITNVLIEFIDPSEAVVESYFTALQRGPDNDGEARQVLLCGRYCDLFQ HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KREGAWRIAERTVVYDWLEEQTPPAVPEAERFGLRQPIGAAHPNDPVYALRKRRSSSSK HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]