| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fabG [C]
Identifier: 13474896
GI number: 13474896
Start: 4748021
End: 4749238
Strand: Direct
Name: fabG [C]
Synonym: mlr5879
Alternate gene names: 13474896
Gene position: 4748021-4749238 (Clockwise)
Preceding gene: 13474895
Following gene: 13474897
Centisome position: 67.48
GC content: 64.12
Gene sequence:
>1218_bases ATGAAGCAGGCAGGACGGGTCGTCATCATAACGGGAGCGGCAGGCGGAATCGGCCGTGCGCTGGTCGAGATCGTTGCCGC CGATGGAGACATCGTCGTTGCGGTGGACCTTCCTGGCAGCGGCGTTCTTGAACTGGCCGGCGGTCTCGGCCATCCGCATC TGGGCCTCGAATGCGATGTCTCACGAGAAGAGGACATTGTCGCCCTATACGGCCGCATCGAAGCGCAGTTCGCGAAAATC GATGTTCTCGTCAACAACGCGGCGATAGGACCCGCCATGGCTGCGACTATCGACACCGGTTTCGAGGCCTTCCGACGCGT GCTGGCAACAAATCTGATCGGGCCTTTCATCATGGCCGGCGAAGCGGCGAGGCGCATGCAGCCCGGCGCTGCCATTGTCA ACGTCGCTTCGCTGGCGGGCGTGCTCGGCAATCCCAAGCGCAACGCCTATGCCAGCTCGAAGGCAGGCTTGATCGCTCTC ACGAGATCGCTTGCATGCGAGTGGGCCTCGCGCGGCATCCGCGTAACGGCGGTAGCGCCAGGATACGTGCGCACGCCGAT GGTGGCGGAACTGGAACGTGCGGGCAAGATGGACCTCGCGGCCGTGCGCCGCCGCGTGCCCATGGGGCGAATGGCGCGCC CCGACGAGATCGCTCGGGCCGTGCGTTTTTTGGCCAGCGCACAGACGGGCTACATCACAGGATCGGTGCTGACGGTCGAC GGCGGTTGGATGTCGTTCAACCAGCCGGGCGACGCGCACCCGCCGGTCGACGAGACGCCTCGAGCCGAACTCTTCCGGCC GGCCGAACGAACTGGCGCGCGCACAGTGGTCGTGACGGGCGGCGCGAACGGTATAGGCGCCGCCGTCGTTCGCCGCTTTG CCGCGAACTCCGACACAGTCGTGATTGCTGATAAAGATGGTGCTGGGGCGGCAGAACTCGCTGATTTGCTGGGCGGCAGG CACGTGGCGAAATCCGTCGACTTGGCGGTCGAGAGCGACGTGGTGGCGCTGTTCGAGGAAATACGGGGGCGCTTCGGTCG CATCGAGGTCCTCGTCAACTGTGCTGCTATTGCCGATACGTTTGTGCGAGGGATCGAAATCCCGCAACAGATTGAGCGGG TGCTGGACGTCAATCTCACCGGCACCTTCACCTGCGCGCGAGGCGATCAAGTCGATGGACGCCGGCGGCGTAATCCTCAA TCTTGGATCGATCAATAG
Upstream 100 bases:
>100_bases GTCTACCCGGTATGGAAACTCGCCGTCACCAGGACGTCCGCGACCGGTCTTGCGGCTGACTCGCGTCGATATCTCTGACG CTGGCTGCGGAGAGGTTCAT
Downstream 100 bases:
>100_bases TTTCCTGCCCTTCGTGCCGCGCCATGCCTATGGGGCGTCCACGGCGGGTATGAACATTCTGACCCGGTGCATGGCGGCCG AACTCGGGTCGGTCGGCATC
Product: short chain dehydrogenase
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKQAGRVVIITGAAGGIGRALVEIVAADGDIVVAVDLPGSGVLELAGGLGHPHLGLECDVSREEDIVALYGRIEAQFAKI DVLVNNAAIGPAMAATIDTGFEAFRRVLATNLIGPFIMAGEAARRMQPGAAIVNVASLAGVLGNPKRNAYASSKAGLIAL TRSLACEWASRGIRVTAVAPGYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLASAQTGYITGSVLTVD GGWMSFNQPGDAHPPVDETPRAELFRPAERTGARTVVVTGGANGIGAAVVRRFAANSDTVVIADKDGAGAAELADLLGGR HVAKSVDLAVESDVVALFEEIRGRFGRIEVLVNCAAIADTFVRGIEIPQQIERVLDVNLTGTFTCARGDQVDGRRRRNPQ SWIDQ
Sequences:
>Translated_405_residues MKQAGRVVIITGAAGGIGRALVEIVAADGDIVVAVDLPGSGVLELAGGLGHPHLGLECDVSREEDIVALYGRIEAQFAKI DVLVNNAAIGPAMAATIDTGFEAFRRVLATNLIGPFIMAGEAARRMQPGAAIVNVASLAGVLGNPKRNAYASSKAGLIAL TRSLACEWASRGIRVTAVAPGYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLASAQTGYITGSVLTVD GGWMSFNQPGDAHPPVDETPRAELFRPAERTGARTVVVTGGANGIGAAVVRRFAANSDTVVIADKDGAGAAELADLLGGR HVAKSVDLAVESDVVALFEEIRGRFGRIEVLVNCAAIADTFVRGIEIPQQIERVLDVNLTGTFTCARGDQVDGRRRRNPQ SWIDQ >Mature_405_residues MKQAGRVVIITGAAGGIGRALVEIVAADGDIVVAVDLPGSGVLELAGGLGHPHLGLECDVSREEDIVALYGRIEAQFAKI DVLVNNAAIGPAMAATIDTGFEAFRRVLATNLIGPFIMAGEAARRMQPGAAIVNVASLAGVLGNPKRNAYASSKAGLIAL TRSLACEWASRGIRVTAVAPGYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLASAQTGYITGSVLTVD GGWMSFNQPGDAHPPVDETPRAELFRPAERTGARTVVVTGGANGIGAAVVRRFAANSDTVVIADKDGAGAAELADLLGGR HVAKSVDLAVESDVVALFEEIRGRFGRIEVLVNCAAIADTFVRGIEIPQQIERVLDVNLTGTFTCARGDQVDGRRRRNPQ SWIDQ
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=37.1900826446281, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=31.4741035856574, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI19923817, Length=268, Percent_Identity=30.5970149253731, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI59889578, Length=189, Percent_Identity=31.7460317460317, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=30.7377049180328, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=33.8645418326693, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=32.4110671936759, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI31542939, Length=209, Percent_Identity=27.7511961722488, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=31.8367346938775, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=33.0612244897959, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=27.8688524590164, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI83715985, Length=251, Percent_Identity=31.4741035856574, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI109715829, Length=235, Percent_Identity=28.936170212766, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI20149619, Length=221, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI33667109, Length=203, Percent_Identity=30.0492610837438, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4503301, Length=207, Percent_Identity=27.0531400966184, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=27.4725274725275, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=26.9387755102041, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI126723191, Length=179, Percent_Identity=29.608938547486, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=37.3015873015873, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=35.2226720647773, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=32.2448979591837, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=31.7460317460317, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=30.6451612903226, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.4516129032258, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=31.6205533596838, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=28.2258064516129, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=27.906976744186, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=31.4741035856574, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=29.2, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787545, Length=210, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=37.4485596707819, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=34.1463414634146, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=29.8039215686275, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=28.7937743190661, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=30.5882352941176, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=33.739837398374, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=29.7959183673469, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.7937743190661, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=32.0610687022901, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=31.8007662835249, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=28.957528957529, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=30.6513409961686, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17561272, Length=206, Percent_Identity=30.5825242718447, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=30.7392996108949, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=29.2307692307692, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=29.4573643410853, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=28.6821705426357, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=29.1187739463602, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=31.1538461538462, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.0992366412214, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=28.4615384615385, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=30.1526717557252, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=28.4090909090909, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=26.7206477732794, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17563726, Length=262, Percent_Identity=27.0992366412214, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17567345, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=27.710843373494, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=32.8125, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322067, Length=190, Percent_Identity=30.5263157894737, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=34.4262295081967, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=33.469387755102, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=33.984375, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=32.1285140562249, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=34.6613545816733, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=31.7460317460317, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24644339, Length=264, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=33.2, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=30.3643724696356, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI281364892, Length=218, Percent_Identity=29.3577981651376, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571387, Length=208, Percent_Identity=31.7307692307692, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=27.6041666666667, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641388, Length=234, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641232, Length=236, Percent_Identity=28.8135593220339, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI281364494, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24663911, Length=238, Percent_Identity=27.7310924369748, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 42530; Mature: 42530
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAGRVVIITGAAGGIGRALVEIVAADGDIVVAVDLPGSGVLELAGGLGHPHLGLECDV CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEECC SREEDIVALYGRIEAQFAKIDVLVNNAAIGPAMAATIDTGFEAFRRVLATNLIGPFIMAG CCCCCEEEEEHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EAARRMQPGAAIVNVASLAGVLGNPKRNAYASSKAGLIALTRSLACEWASRGIRVTAVAP CHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECC GYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLASAQTGYITGSVLTVD CCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEE GGWMSFNQPGDAHPPVDETPRAELFRPAERTGARTVVVTGGANGIGAAVVRRFAANSDTV CCEEECCCCCCCCCCCCCCCHHHHCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEE VIADKDGAGAAELADLLGGRHVAKSVDLAVESDVVALFEEIRGRFGRIEVLVNCAAIADT EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH FVRGIEIPQQIERVLDVNLTGTFTCARGDQVDGRRRRNPQSWIDQ HHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCCHHHHCC >Mature Secondary Structure MKQAGRVVIITGAAGGIGRALVEIVAADGDIVVAVDLPGSGVLELAGGLGHPHLGLECDV CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEECC SREEDIVALYGRIEAQFAKIDVLVNNAAIGPAMAATIDTGFEAFRRVLATNLIGPFIMAG CCCCCEEEEEHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EAARRMQPGAAIVNVASLAGVLGNPKRNAYASSKAGLIALTRSLACEWASRGIRVTAVAP CHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECC GYVRTPMVAELERAGKMDLAAVRRRVPMGRMARPDEIARAVRFLASAQTGYITGSVLTVD CCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEE GGWMSFNQPGDAHPPVDETPRAELFRPAERTGARTVVVTGGANGIGAAVVRRFAANSDTV CCEEECCCCCCCCCCCCCCCHHHHCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEE VIADKDGAGAAELADLLGGRHVAKSVDLAVESDVVALFEEIRGRFGRIEVLVNCAAIADT EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH FVRGIEIPQQIERVLDVNLTGTFTCARGDQVDGRRRRNPQSWIDQ HHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]