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The map label for this gene is 13474867

Identifier: 13474867

GI number: 13474867

Start: 4719096

End: 4719578

Strand: Direct

Name: 13474867

Synonym: mlr5843

Alternate gene names: NA

Gene position: 4719096-4719578 (Clockwise)

Preceding gene: 13474866

Following gene: 13474869

Centisome position: 67.07

GC content: 61.08

Gene sequence:

>483_bases
ATGGCATCAACCCCAAGACGGTCGCGAAGTGGAGAAGCGGAATTCGACCGCGATCTGTCCACCGGCTCCAGGGAGTCGAC
AGTTCTGTCTGTCGAGGAAAACCGTTGTTGTGGCCTTCCGCCGCAACAAGGCTGCTGCCGCTCGACGATTGCCTCTACGC
GTTGCAGCCGACGTCGCGCATCTGACGCGCTCCCACCGCTGCCTGCAGGCAAGCATCGGCCGATTGCCAGATGTCGACGG
CGACAGGCCGGCGAGAAGAGTCGAGAGAATGAACCGGACCATCAAGACGCAACCGTCAAGCGCTTCCACTACGACGATCG
CGACCAACTGCGTCGGCATCTTGCCGACTTCGTCGCGGCCTACAATTTCGGCCGCAAGCTGAAGACCCTCAAGGGCCTCA
CGCCCTGCGAGTTCATCTGGAAGGCATGGGCTTCCCAGCCCGAGCGTTCACTTTCAATCCGCTCCAGCAAATGCCGGGAC
TAA

Upstream 100 bases:

>100_bases
TGCTTGCATGTCGCGGAAAAGAAATTTCGCCATTCTCGTCCGACTCAAAGGATGCACTATGGGCTAGGTGAAGCGAGCCT
GAGGTCGCTTTCGGAGCGCT

Downstream 100 bases:

>100_bases
ACATTTAGCAAATGGCGGATGAGGTGCACGATGCAAGTTAGCACGTCGCCTGGGGAAAGGTGCGCCGATCGCCTCCCTCT
TGGCCAACCAGTTCCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Integrase Protein; Transposase Of

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MASTPRRSRSGEAEFDRDLSTGSRESTVLSVEENRCCGLPPQQGCCRSTIASTRCSRRRASDALPPLPAGKHRPIARCRR
RQAGEKSRENEPDHQDATVKRFHYDDRDQLRRHLADFVAAYNFGRKLKTLKGLTPCEFIWKAWASQPERSLSIRSSKCRD

Sequences:

>Translated_160_residues
MASTPRRSRSGEAEFDRDLSTGSRESTVLSVEENRCCGLPPQQGCCRSTIASTRCSRRRASDALPPLPAGKHRPIARCRR
RQAGEKSRENEPDHQDATVKRFHYDDRDQLRRHLADFVAAYNFGRKLKTLKGLTPCEFIWKAWASQPERSLSIRSSKCRD
>Mature_159_residues
ASTPRRSRSGEAEFDRDLSTGSRESTVLSVEENRCCGLPPQQGCCRSTIASTRCSRRRASDALPPLPAGKHRPIARCRRR
QAGEKSRENEPDHQDATVKRFHYDDRDQLRRHLADFVAAYNFGRKLKTLKGLTPCEFIWKAWASQPERSLSIRSSKCRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18247; Mature: 18115

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTPRRSRSGEAEFDRDLSTGSRESTVLSVEENRCCGLPPQQGCCRSTIASTRCSRRRA
CCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SDALPPLPAGKHRPIARCRRRQAGEKSRENEPDHQDATVKRFHYDDRDQLRRHLADFVAA
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
YNFGRKLKTLKGLTPCEFIWKAWASQPERSLSIRSSKCRD
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
ASTPRRSRSGEAEFDRDLSTGSRESTVLSVEENRCCGLPPQQGCCRSTIASTRCSRRRA
CCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SDALPPLPAGKHRPIARCRRRQAGEKSRENEPDHQDATVKRFHYDDRDQLRRHLADFVAA
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
YNFGRKLKTLKGLTPCEFIWKAWASQPERSLSIRSSKCRD
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA