The gene/protein map for NC_002678 is currently unavailable.
Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474776

Identifier: 13474776

GI number: 13474776

Start: 4621598

End: 4622740

Strand: Direct

Name: 13474776

Synonym: mlr5740

Alternate gene names: NA

Gene position: 4621598-4622740 (Clockwise)

Preceding gene: 13474775

Following gene: 13474777

Centisome position: 65.68

GC content: 61.42

Gene sequence:

>1143_bases
ATGTTTTGGCAGACCGGTAGATTCGCCATGCGGCAGTTGCTGCCGATCGCTGCTCTGCTGCTCGCAACCAATGTCGCCTC
GATGGCCGAGGGGTCACCCGGCATTACCGTTCCGACGGTTCTACAGCCATTCGTTCCAACGGCGCCGAGCTGCTCGAAGC
CAACCGACCTCAAGCCGATCCTGGCATTCGCCAAGGACAACAAGCGTGAGTTCATCGAGGGTGTCGATCATGGCCTGGCT
CAGGCGGCCGAAGACAACCATCTGGAATATCGTGTCGCCCTCGCCGCCAATGACAGCGCCAAGATGATCTCGGACGTCGA
GGCGCTGCGCGCCGAGCGGGTGGGCGGGATCGTTGTGTCTCCCGTAGACCCGGCGGCGCTGGCCCCCAGCCTGCAAAAGG
CCATGTGGTCTGGAACCTATGTCAGCACGGTCGTCGCACCGCCGGCAACGTCGCTGCTCAACGCGCCGCAATATCTCACC
GGGAAGGAACTGGGAGACGCGGCGGTCGCGTATATCAAGGACAAGTTCCACGGCCGAGCCGACGTGGTGCTGCTGACCCA
GGACAGCCTGCAATTTCTCACGCCGCGTTTCGTCGCCATCCGCGATGCGCTCGACACGCTGCCAGACGTGCGCATCGTAG
CCGATATCTCCCCCAATCCCGTCAGCAAGGAAGGAGGATTGGCCACGATGCGGATGGTCATCCAGGCGCATCCGCATGTG
GACGTGGTGCTGGGCGCCGATGGTGTCGTCCTTGGCGCCCTGCAGGCGCTGCGGGAGGCTGGCAAGGACAGGCCGGATCA
GTTCATCGGAGGGATCGACGGCGAGCCCGAGGCAATAGCCGAAATCACAAAGGGAGGTCCCTACAAGATGACGGTCAGCC
TGAATTCGCCTGTCTTCGGATATGCGATGGGCCAGCATGCGGCCGACTGGCTCGAGGGAAAGCCGATCCCGCAAGCGATG
GATATCCTGCCGCACGTCATCACGGCGCAAAACCTTGGCGACTATCAAAAGGATCTTGCCAATCCAGGCGCGGTCTATGC
CGATCCGGCGCGAAGAGATGGCTATCTACGGATGTATGGCAACATCTGCTACGACAGCCGCGATCAATATCTCAATTTCC
CCTGGTCGTCTGAATCTCGATAG

Upstream 100 bases:

>100_bases
TTGCCCTGCCGCAGTGACGGGCTATGCGCGCTGGCAGGCTTTGCCTCCGCCATGGGTCATGCAAGGATGCGCCCGGCGTT
TTCTTCAGGTGGAGAGTTCG

Downstream 100 bases:

>100_bases
TAGACGCACCATCCGGAGGCTGGCCAACAGGCCATTTGACCGGACCAACGCCATTACGACACCGACGTGTCGAATTGTTT
GCATTCAAACGACTTTTGCG

Product: ribose ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFWQTGRFAMRQLLPIAALLLATNVASMAEGSPGITVPTVLQPFVPTAPSCSKPTDLKPILAFAKDNKREFIEGVDHGLA
QAAEDNHLEYRVALAANDSAKMISDVEALRAERVGGIVVSPVDPAALAPSLQKAMWSGTYVSTVVAPPATSLLNAPQYLT
GKELGDAAVAYIKDKFHGRADVVLLTQDSLQFLTPRFVAIRDALDTLPDVRIVADISPNPVSKEGGLATMRMVIQAHPHV
DVVLGADGVVLGALQALREAGKDRPDQFIGGIDGEPEAIAEITKGGPYKMTVSLNSPVFGYAMGQHAADWLEGKPIPQAM
DILPHVITAQNLGDYQKDLANPGAVYADPARRDGYLRMYGNICYDSRDQYLNFPWSSESR

Sequences:

>Translated_380_residues
MFWQTGRFAMRQLLPIAALLLATNVASMAEGSPGITVPTVLQPFVPTAPSCSKPTDLKPILAFAKDNKREFIEGVDHGLA
QAAEDNHLEYRVALAANDSAKMISDVEALRAERVGGIVVSPVDPAALAPSLQKAMWSGTYVSTVVAPPATSLLNAPQYLT
GKELGDAAVAYIKDKFHGRADVVLLTQDSLQFLTPRFVAIRDALDTLPDVRIVADISPNPVSKEGGLATMRMVIQAHPHV
DVVLGADGVVLGALQALREAGKDRPDQFIGGIDGEPEAIAEITKGGPYKMTVSLNSPVFGYAMGQHAADWLEGKPIPQAM
DILPHVITAQNLGDYQKDLANPGAVYADPARRDGYLRMYGNICYDSRDQYLNFPWSSESR
>Mature_380_residues
MFWQTGRFAMRQLLPIAALLLATNVASMAEGSPGITVPTVLQPFVPTAPSCSKPTDLKPILAFAKDNKREFIEGVDHGLA
QAAEDNHLEYRVALAANDSAKMISDVEALRAERVGGIVVSPVDPAALAPSLQKAMWSGTYVSTVVAPPATSLLNAPQYLT
GKELGDAAVAYIKDKFHGRADVVLLTQDSLQFLTPRFVAIRDALDTLPDVRIVADISPNPVSKEGGLATMRMVIQAHPHV
DVVLGADGVVLGALQALREAGKDRPDQFIGGIDGEPEAIAEITKGGPYKMTVSLNSPVFGYAMGQHAADWLEGKPIPQAM
DILPHVITAQNLGDYQKDLANPGAVYADPARRDGYLRMYGNICYDSRDQYLNFPWSSESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40859; Mature: 40859

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWQTGRFAMRQLLPIAALLLATNVASMAEGSPGITVPTVLQPFVPTAPSCSKPTDLKPI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
LAFAKDNKREFIEGVDHGLAQAAEDNHLEYRVALAANDSAKMISDVEALRAERVGGIVVS
HHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEC
PVDPAALAPSLQKAMWSGTYVSTVVAPPATSLLNAPQYLTGKELGDAAVAYIKDKFHGRA
CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
DVVLLTQDSLQFLTPRFVAIRDALDTLPDVRIVADISPNPVSKEGGLATMRMVIQAHPHV
CEEEEECCCHHHHCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCE
DVVLGADGVVLGALQALREAGKDRPDQFIGGIDGEPEAIAEITKGGPYKMTVSLNSPVFG
EEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCEEE
YAMGQHAADWLEGKPIPQAMDILPHVITAQNLGDYQKDLANPGAVYADPARRDGYLRMYG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCEEEEEC
NICYDSRDQYLNFPWSSESR
CEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MFWQTGRFAMRQLLPIAALLLATNVASMAEGSPGITVPTVLQPFVPTAPSCSKPTDLKPI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
LAFAKDNKREFIEGVDHGLAQAAEDNHLEYRVALAANDSAKMISDVEALRAERVGGIVVS
HHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEC
PVDPAALAPSLQKAMWSGTYVSTVVAPPATSLLNAPQYLTGKELGDAAVAYIKDKFHGRA
CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
DVVLLTQDSLQFLTPRFVAIRDALDTLPDVRIVADISPNPVSKEGGLATMRMVIQAHPHV
CEEEEECCCHHHHCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCE
DVVLGADGVVLGALQALREAGKDRPDQFIGGIDGEPEAIAEITKGGPYKMTVSLNSPVFG
EEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCEEE
YAMGQHAADWLEGKPIPQAMDILPHVITAQNLGDYQKDLANPGAVYADPARRDGYLRMYG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCEEEEEC
NICYDSRDQYLNFPWSSESR
CEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA