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The map label for this gene is rocF [H]

Identifier: 13474743

GI number: 13474743

Start: 4586291

End: 4588117

Strand: Direct

Name: rocF [H]

Synonym: mlr5700

Alternate gene names: 13474743

Gene position: 4586291-4588117 (Clockwise)

Preceding gene: 13474742

Following gene: 13474751

Centisome position: 65.18

GC content: 65.19

Gene sequence:

>1827_bases
ATGTCAGGACCGCAAGTCGCCATCGACCTTGGCCGCATCGAGCGCAACGCCCGCACCATCGTCGACCGCTGCGCTTTGTC
AGGCATCAAGGTGTTCGGCGTCACCAAGGGCATGTGCGGCATGCCGCAAGTGGCGCGCGCCATGTTGCGCGGCGGCGTCG
CCGGCATTGCCGAATCGCGTTTCGAAAACATCCGCCGGTTGCGCGACAGCGGCATCAACGCGCCGATCATGCTGCTGCGC
AGCCCGCCCATGGCGCGCATCGAGGAGGTGGTGCGCACGGTCGACATCAGCCTGCAGTCGGAGCTCGCCACCATCCGCGA
AATCTCTCGCATCGCCGAGCGCATGGGCCGCGTCCACGACATCATGCTGATGATCGACCTTGGCGATCTGCGCGAAGGCA
TCTGGCCGAACGATCTTATTCCCACGGTCGAGCAGATCCTGCAGTTCAAGGGCGTGCGTATCGCCGGTATCGGCACCAAT
CTCGGCTGCTTCGGCGCCATCATGCCGACGCCGGAAAATCTCGGGCAACTTGTCGCCCATGCCTACAAGACCGAGCGCCT
GTCAGGCAAAAGCCTCGACTGGATCTCGGGCGGTGCCTCGTCGTCGCTGACCTTGCTGCTTGAAGGCAGACTTCCGGCCG
GCATCAACAATCTCAGGGTCGGCGAGGCGATCCTGCAAGGCGGTGTGGAGACCTTCCGCGATGTGCCATGGGCCGAACTC
GAGCCCGATGCCTGCCGCCTGACCAGCGACATCATCGAGGTCAAGCTGAAGCCGTCGCGGCCGATCGGCGAGTCCGGTTA
CGACGCCTTCGGCAACCAGCCGGTCTTTCCCGACGAGGGCGACAGGCTGCGTGCCATCGCCAATATCGGCCGCGAGGATG
TGCTGGTCGAAGGACTGACGCCGATCGCCAAGGGGATTCGCGTGCTCGGCGCCTCCAGTGACCATCTGCTGCTCGACGTG
CAGGACGCCGATCCGCGGCCCGCTGTGGGAGATCGCGTCGCCTTCCGCATGAACTATGGCGCCATGCTGCTGGCGATGAC
CTCGGAATATGTCGAAAAGGCCCCAATGCACGATGTCGAGGACTTTTACGGCCGCAAGATGGTGTCGATCTCGGCGGAAC
AGGGGGCTGCCGGCATCCTTGCCCGGGAAGGCACCGGCGCCCGGCTGGAAGCGATGAATTTCGATGTCGTCGAGTTGGCC
GATTTCGAGCGGCCGCCATCCGGGTTGATCCGGCTGACTGCTGGCGCCGATCGCCGCGTCGCCCACAATGCGCTGACGGC
GACGGCGCGCGCGACGCACTCCTTCGGCCTGATCTGGATCGATTCCATCGCCGCGCTGATGCCGGAAGGCGAACAGGGTA
TCGACCTGCCGGAAGGCTCCGTGCTGGCCCGGACCCTCGGCCTCGATCACAAGGCCGGCGCGCTGCAGCCGCAGCTGTCG
CCGGAAAATGTCGTTATCGTCGGCCTGCGCCATGCCGATCCGGCCGAGGCGCGGGTGCTGAAGGATTCGCGGGTGTCGGC
CTTCACCATGACGGATATCGACGCCATGGGCATGCGCGACCTTATGCATGAGGCGATCCGCATCGCCCCGTCGGGCACGC
AAGGCTTTCACGTCAGCTATTCACCGACAGCGACCGAATTCGCCGGCTGGGCGGCCGGCTCCGGTGGGCTGACCGTGCGC
GAGACGCATCAGGCGATGGAGGCTATCGCACTGTCCGGCGGGCTTTTGTCGATGGACGTTTCGGGGCTGACCGCTGATCT
CGAACCGAGGATCGCCACCGACGCCGTCAGCTTCGTCATGTCGGCCTTCGGCAAGCGGATCCTCTGA

Upstream 100 bases:

>100_bases
GGCTGGACCATGGCCTGCGGCTCGGGAAAATTCCTGGCCGACCTCGTTGCCGGCCGCAAGCCCGAGATCGACCCGCAGGG
GCTTGTGTACGGGGGGTAGG

Downstream 100 bases:

>100_bases
TCAGCCCCGTGCTTCGACCGCCACGCGCCAGGCGTTGGCATAGTCGGCCCAGGCCCGATCGGTCGGCGGCTCTATTCTTT
CGCCTTTGCCATACGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MSGPQVAIDLGRIERNARTIVDRCALSGIKVFGVTKGMCGMPQVARAMLRGGVAGIAESRFENIRRLRDSGINAPIMLLR
SPPMARIEEVVRTVDISLQSELATIREISRIAERMGRVHDIMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTN
LGCFGAIMPTPENLGQLVAHAYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAEL
EPDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLVEGLTPIAKGIRVLGASSDHLLLDV
QDADPRPAVGDRVAFRMNYGAMLLAMTSEYVEKAPMHDVEDFYGRKMVSISAEQGAAGILAREGTGARLEAMNFDVVELA
DFERPPSGLIRLTAGADRRVAHNALTATARATHSFGLIWIDSIAALMPEGEQGIDLPEGSVLARTLGLDHKAGALQPQLS
PENVVIVGLRHADPAEARVLKDSRVSAFTMTDIDAMGMRDLMHEAIRIAPSGTQGFHVSYSPTATEFAGWAAGSGGLTVR
ETHQAMEAIALSGGLLSMDVSGLTADLEPRIATDAVSFVMSAFGKRIL

Sequences:

>Translated_608_residues
MSGPQVAIDLGRIERNARTIVDRCALSGIKVFGVTKGMCGMPQVARAMLRGGVAGIAESRFENIRRLRDSGINAPIMLLR
SPPMARIEEVVRTVDISLQSELATIREISRIAERMGRVHDIMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTN
LGCFGAIMPTPENLGQLVAHAYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAEL
EPDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLVEGLTPIAKGIRVLGASSDHLLLDV
QDADPRPAVGDRVAFRMNYGAMLLAMTSEYVEKAPMHDVEDFYGRKMVSISAEQGAAGILAREGTGARLEAMNFDVVELA
DFERPPSGLIRLTAGADRRVAHNALTATARATHSFGLIWIDSIAALMPEGEQGIDLPEGSVLARTLGLDHKAGALQPQLS
PENVVIVGLRHADPAEARVLKDSRVSAFTMTDIDAMGMRDLMHEAIRIAPSGTQGFHVSYSPTATEFAGWAAGSGGLTVR
ETHQAMEAIALSGGLLSMDVSGLTADLEPRIATDAVSFVMSAFGKRIL
>Mature_607_residues
SGPQVAIDLGRIERNARTIVDRCALSGIKVFGVTKGMCGMPQVARAMLRGGVAGIAESRFENIRRLRDSGINAPIMLLRS
PPMARIEEVVRTVDISLQSELATIREISRIAERMGRVHDIMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTNL
GCFGAIMPTPENLGQLVAHAYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAELE
PDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLVEGLTPIAKGIRVLGASSDHLLLDVQ
DADPRPAVGDRVAFRMNYGAMLLAMTSEYVEKAPMHDVEDFYGRKMVSISAEQGAAGILAREGTGARLEAMNFDVVELAD
FERPPSGLIRLTAGADRRVAHNALTATARATHSFGLIWIDSIAALMPEGEQGIDLPEGSVLARTLGLDHKAGALQPQLSP
ENVVIVGLRHADPAEARVLKDSRVSAFTMTDIDAMGMRDLMHEAIRIAPSGTQGFHVSYSPTATEFAGWAAGSGGLTVRE
THQAMEAIALSGGLLSMDVSGLTADLEPRIATDAVSFVMSAFGKRIL

Specific function: Controls arginine catabolism [H]

COG id: COG3457

COG function: function code E; Predicted amino acid racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325146, Length=195, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014033
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.1 [H]

Molecular weight: Translated: 65246; Mature: 65115

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPQVAIDLGRIERNARTIVDRCALSGIKVFGVTKGMCGMPQVARAMLRGGVAGIAESR
CCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH
FENIRRLRDSGINAPIMLLRSPPMARIEEVVRTVDISLQSELATIREISRIAERMGRVHD
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTNLGCFGAIMPTPENLGQLVAH
EEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCHHHHHHHHHH
AYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAEL
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCC
EPDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLVEGLT
CCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCH
PIAKGIRVLGASSDHLLLDVQDADPRPAVGDRVAFRMNYGAMLLAMTSEYVEKAPMHDVE
HHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCHH
DFYGRKMVSISAEQGAAGILAREGTGARLEAMNFDVVELADFERPPSGLIRLTAGADRRV
HHHCCEEEEEECCCCCCEEEEECCCCCEEEECCCCEEEHHCCCCCCCCEEEEECCCCCHH
AHNALTATARATHSFGLIWIDSIAALMPEGEQGIDLPEGSVLARTLGLDHKAGALQPQLS
HHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PENVVIVGLRHADPAEARVLKDSRVSAFTMTDIDAMGMRDLMHEAIRIAPSGTQGFHVSY
CCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHEECCCCCCCEEEEE
SPTATEFAGWAAGSGGLTVRETHQAMEAIALSGGLLSMDVSGLTADLEPRIATDAVSFVM
CCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH
SAFGKRIL
HHHHHCCC
>Mature Secondary Structure 
SGPQVAIDLGRIERNARTIVDRCALSGIKVFGVTKGMCGMPQVARAMLRGGVAGIAESR
CCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH
FENIRRLRDSGINAPIMLLRSPPMARIEEVVRTVDISLQSELATIREISRIAERMGRVHD
HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTNLGCFGAIMPTPENLGQLVAH
EEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCHHHHHHHHHH
AYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAEL
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCC
EPDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLVEGLT
CCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCH
PIAKGIRVLGASSDHLLLDVQDADPRPAVGDRVAFRMNYGAMLLAMTSEYVEKAPMHDVE
HHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCHH
DFYGRKMVSISAEQGAAGILAREGTGARLEAMNFDVVELADFERPPSGLIRLTAGADRRV
HHHCCEEEEEECCCCCCEEEEECCCCCEEEECCCCEEEHHCCCCCCCCEEEEECCCCCHH
AHNALTATARATHSFGLIWIDSIAALMPEGEQGIDLPEGSVLARTLGLDHKAGALQPQLS
HHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PENVVIVGLRHADPAEARVLKDSRVSAFTMTDIDAMGMRDLMHEAIRIAPSGTQGFHVSY
CCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHEECCCCCCCEEEEE
SPTATEFAGWAAGSGGLTVRETHQAMEAIALSGGLLSMDVSGLTADLEPRIATDAVSFVM
CCCHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH
SAFGKRIL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8647285; 10196128 [H]