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The map label for this gene is dadA2

Identifier: 13474742

GI number: 13474742

Start: 4585039

End: 4586289

Strand: Direct

Name: dadA2

Synonym: mlr5698

Alternate gene names: 13474742

Gene position: 4585039-4586289 (Clockwise)

Preceding gene: 13474741

Following gene: 13474743

Centisome position: 65.16

GC content: 64.99

Gene sequence:

>1251_bases
ATGAAGATAACGGTGCTCGGCGCCGGCGTTGTCGGTACGGCAGCGGCCTATTACCTGGCCGCCGACGGGCACGAGGTCAC
CGTGATCGAGCGCCATGCGGCGCCCGCGCGGGGCACCAGCCAATCCAATGCCGGCTTGGTTTCGCCAGGCGACGCCACCG
CTTGGGCTTCGCCGGCGGCACTGAAGACGTTCCTGCGCGGGCTCTACAATCATGATCTCGGCATCAAGGTGCGGCTGCGC
TTCGATCCCTATTTCCTCGCCTGGAGCCTGCGCTTCCTGCGCCAATGCACGGTGGCCCGCCTGCGCGCCAACAGCCAGGT
CAAGCTGCGCCTGGCGCTCTATTCGCGCGACTGCATCAACGCCATCTCGGCCGACACCGGCATCCACTATGACGAGCGCA
AGAAAGGCATCCTGTATTTCTTCCGCTCGCAGCACAGCCTCAACACCGGCACCGACAATTACCGCTATCTGGCCGAGCAC
GGCCTGCCGATCGAGATCGTCGGCCGCGACCGGCTGGTCGAACTCGAGCCGGGCCTTGCCGGGGTGAAGGAAAAGATCGC
CGGCGGCGTCTATTCGCCAATCGATCAGACCGGCGATTCCAGACTGTTCGTCGACAATCTCGCCGCCTATGCCAGCGAAA
AGCTCGGCGTCAAATTCCTGTTCGGCACCACGGTCGAGGGCCTCGATATCCAAGGCGACCGAGTGCGGGCGGTTATGACC
TCGGCCGGACCGGTGACGGGTGACGCCGTCGTCATCTCGATGGGGCCGGAAAGCGGCCTGCTTGGCCGCCGCTACGGCAT
CGACCTGCCGGTCTATCCGGTGAAGGGCTATACCGCGACCATTCCGCTGGAAGACGAGAGCAAGGGGCCGACCATAGGCG
GCGCCGACGAGGACCAGCTGATGGCCTATTCGAGGCTTGGCAACCGGTTGCGGCTGGCTTCGACCGCCGAATTCACCGGC
TTCGACCGCACCCATAAGCCAAGCGACTTTACCACCATGTTCAGGACCGCCAGGGATCTTTTCCCCGGCGCCTTCGACGA
GAAGAAGGCGGAGCTCTGGGCGGGGCTGCGGCCAATGATGCCGGGCTCCGTGCCGGTCATCGGCCAAGCGCGCTACAAAA
ACCTCTATCTCGACACCGGCCACGGCCATGTCGGCTGGACCATGGCCTGCGGCTCGGGAAAATTCCTGGCCGACCTCGTT
GCCGGCCGCAAGCCCGAGATCGACCCGCAGGGGCTTGTGTACGGGGGGTAG

Upstream 100 bases:

>100_bases
GGCTGAGCCAAGCCCCGAGGGCTCGCAAGGCACGCGCCGACGCGCTATGGAAGGCATTCGCGGCAGGGCGCTGCGCCGCG
AAGAGCTTTTGGGGGATGGC

Downstream 100 bases:

>100_bases
GATGTCAGGACCGCAAGTCGCCATCGACCTTGGCCGCATCGAGCGCAACGCCCGCACCATCGTCGACCGCTGCGCTTTGT
CAGGCATCAAGGTGTTCGGC

Product: D-amino acid dehydrogenase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKITVLGAGVVGTAAAYYLAADGHEVTVIERHAAPARGTSQSNAGLVSPGDATAWASPAALKTFLRGLYNHDLGIKVRLR
FDPYFLAWSLRFLRQCTVARLRANSQVKLRLALYSRDCINAISADTGIHYDERKKGILYFFRSQHSLNTGTDNYRYLAEH
GLPIEIVGRDRLVELEPGLAGVKEKIAGGVYSPIDQTGDSRLFVDNLAAYASEKLGVKFLFGTTVEGLDIQGDRVRAVMT
SAGPVTGDAVVISMGPESGLLGRRYGIDLPVYPVKGYTATIPLEDESKGPTIGGADEDQLMAYSRLGNRLRLASTAEFTG
FDRTHKPSDFTTMFRTARDLFPGAFDEKKAELWAGLRPMMPGSVPVIGQARYKNLYLDTGHGHVGWTMACGSGKFLADLV
AGRKPEIDPQGLVYGG

Sequences:

>Translated_416_residues
MKITVLGAGVVGTAAAYYLAADGHEVTVIERHAAPARGTSQSNAGLVSPGDATAWASPAALKTFLRGLYNHDLGIKVRLR
FDPYFLAWSLRFLRQCTVARLRANSQVKLRLALYSRDCINAISADTGIHYDERKKGILYFFRSQHSLNTGTDNYRYLAEH
GLPIEIVGRDRLVELEPGLAGVKEKIAGGVYSPIDQTGDSRLFVDNLAAYASEKLGVKFLFGTTVEGLDIQGDRVRAVMT
SAGPVTGDAVVISMGPESGLLGRRYGIDLPVYPVKGYTATIPLEDESKGPTIGGADEDQLMAYSRLGNRLRLASTAEFTG
FDRTHKPSDFTTMFRTARDLFPGAFDEKKAELWAGLRPMMPGSVPVIGQARYKNLYLDTGHGHVGWTMACGSGKFLADLV
AGRKPEIDPQGLVYGG
>Mature_416_residues
MKITVLGAGVVGTAAAYYLAADGHEVTVIERHAAPARGTSQSNAGLVSPGDATAWASPAALKTFLRGLYNHDLGIKVRLR
FDPYFLAWSLRFLRQCTVARLRANSQVKLRLALYSRDCINAISADTGIHYDERKKGILYFFRSQHSLNTGTDNYRYLAEH
GLPIEIVGRDRLVELEPGLAGVKEKIAGGVYSPIDQTGDSRLFVDNLAAYASEKLGVKFLFGTTVEGLDIQGDRVRAVMT
SAGPVTGDAVVISMGPESGLLGRRYGIDLPVYPVKGYTATIPLEDESKGPTIGGADEDQLMAYSRLGNRLRLASTAEFTG
FDRTHKPSDFTTMFRTARDLFPGAFDEKKAELWAGLRPMMPGSVPVIGQARYKNLYLDTGHGHVGWTMACGSGKFLADLV
AGRKPEIDPQGLVYGG

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=407, Percent_Identity=40.7862407862408, Blast_Score=322, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA2_RHILO (Q98B75)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_106311.1
- ProteinModelPortal:   Q98B75
- GeneID:   1228972
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr5698
- NMPDR:   fig|266835.1.peg.4415
- HOGENOM:   HBG729204
- OMA:   QQATHDE
- BRENDA:   1.4.99.1
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45098; Mature: 45098

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITVLGAGVVGTAAAYYLAADGHEVTVIERHAAPARGTSQSNAGLVSPGDATAWASPAA
CEEEEEECCHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCHHH
LKTFLRGLYNHDLGIKVRLRFDPYFLAWSLRFLRQCTVARLRANSQVKLRLALYSRDCIN
HHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHH
AISADTGIHYDERKKGILYFFRSQHSLNTGTDNYRYLAEHGLPIEIVGRDRLVELEPGLA
HHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHCCCEEEEECCCEEEEECCCCH
GVKEKIAGGVYSPIDQTGDSRLFVDNLAAYASEKLGVKFLFGTTVEGLDIQGDRVRAVMT
HHHHHHCCCCCCCHHCCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEEE
SAGPVTGDAVVISMGPESGLLGRRYGIDLPVYPVKGYTATIPLEDESKGPTIGGADEDQL
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCHHHH
MAYSRLGNRLRLASTAEFTGFDRTHKPSDFTTMFRTARDLFPGAFDEKKAELWAGLRPMM
HHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
PGSVPVIGQARYKNLYLDTGHGHVGWTMACGSGKFLADLVAGRKPEIDPQGLVYGG
CCCCCEEECCEECEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure
MKITVLGAGVVGTAAAYYLAADGHEVTVIERHAAPARGTSQSNAGLVSPGDATAWASPAA
CEEEEEECCHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCHHH
LKTFLRGLYNHDLGIKVRLRFDPYFLAWSLRFLRQCTVARLRANSQVKLRLALYSRDCIN
HHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHH
AISADTGIHYDERKKGILYFFRSQHSLNTGTDNYRYLAEHGLPIEIVGRDRLVELEPGLA
HHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHCCCEEEEECCCEEEEECCCCH
GVKEKIAGGVYSPIDQTGDSRLFVDNLAAYASEKLGVKFLFGTTVEGLDIQGDRVRAVMT
HHHHHHCCCCCCCHHCCCCCEEEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEEE
SAGPVTGDAVVISMGPESGLLGRRYGIDLPVYPVKGYTATIPLEDESKGPTIGGADEDQL
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCHHHH
MAYSRLGNRLRLASTAEFTGFDRTHKPSDFTTMFRTARDLFPGAFDEKKAELWAGLRPMM
HHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
PGSVPVIGQARYKNLYLDTGHGHVGWTMACGSGKFLADLVAGRKPEIDPQGLVYGG
CCCCCEEECCEECEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968