| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474547
Identifier: 13474547
GI number: 13474547
Start: 4369785
End: 4371311
Strand: Reverse
Name: 13474547
Synonym: mll5453
Alternate gene names: NA
Gene position: 4371311-4369785 (Counterclockwise)
Preceding gene: 13474548
Following gene: 13474546
Centisome position: 62.13
GC content: 68.37
Gene sequence:
>1527_bases GTGCGCGGGGAGCCCAAGCAATGGAGAGCTGACTTGGCTATCCCGGCCGCCAATTCCCCGCCAGATCCAGTGCTTGTCGC TTTCAACCGCTTCGGGCTCGGGGCAAGGCCCGGCGACCGCGACAAAGTTACCCACGACCCACGCGGCTATCTGAAGGCGG AACTGCGGCAGCCCGACATCGCCCTGATCTCGCTCGACGACCCGGCCTATGCGAGCCTGCCGGGCAGCACGCCGGCCATC CAGGCCAGCATGGCGGCAAACTTCCAACGCAAGCTCGACCGCGAGCACATGGCCGCCGCAGCACAGCCGGCAATGGCAAG CGCCAAGTCCATGCCCACCCAGGCCACGCCGGCCCCAATTGCGCCTGCTCATCCCCTGCCACCGCCCACGGCCCCGGCCA AGCCCGCGCCGCCGGTCGAGGCTGCGCTGTTCCGGGCCGAAGCCCAGGCGCGCTTCGACAAGGCTTTTCGCGCCGAGGCA GGCTTTGTCGAACGCCTGGTGTATTTCTGGTCGAACCATTTCTGCGTCTCCGTGGCGAAGGACAACATCGTGCGGGCGAG CGCCGGCGCCTTCGAACGGGAAGCGATCCGGCCCTTCGTGCTCGGCCGGTTCGCCGACATGCTGATGGCGGTGGAGCGGC ATCCGGCGATGCTGTTCTATCTCGACAACCAGCAGTCGATCGGCCCGGACTCCCGCGCCGGCAAGAATCGCCGGCGCGGC CTCAATGAGAACCTCGCCCGCGAGATCTTGGAACTGCACACGCTGGGCGTCGGCAGCGGCTATACCCAGGCCGACGTCAC CAGCTTCGCGCGCATCCTGACGGGCTGGACGATGGTCGGGCGCGAGGGCCGGCTTGGCGAACCGGGCAGTTCCGTCTTCA ACGCCAATGCGCATGAGCCGGGCGATGCGGTGCTGCTGGGCAAGACCTATCCGGCCGCCGGCATGGGCCAGGCCGAGGCG GCGCTCAACGACATCGCCAGCCATCCGGCGACGGCGCAGCACATCGCCACGCAACTCGCCCGTCATTTCATAGCCGACGA CCCTCCGCCGGCGGTAGTCGCGCGCCTGGCCAAGGTTTTCGCCAAGAGCGACGGCAATCTCAGGGCACTGGCGGCGACCC TCATCGACATGCCGGAGGCATGGTCGACGCCGCTGGCCAAGATGCGCTCGCCCTTCGACTATATCGCCGCCATCCGCCGG GCGGCCGGTCCGGGTCCGGCCAACGATCCCGGCCAGTCACTCAACTGGCTCAATGCGCTCGGCGAACCGCTCTGGCAGCC GCCGGGGCCGAACGGCTTTTCCGACCAGGCGGACAGCTGGGCCTCGGCCGAAGGCATGAAGATCCGCCTCGACATCGCCT GGCGGGCGGCCCGCCAGGTCAAGGATATCGGCAATCCCAACGACATGCTCGACGCCGTCATCGGTCCCTCAGCCTCGCCG GAAACGCGGCAAGCGGTCGCCCGCGCCGAGTCCAAGCAGCAAGGCCTGGCGCTGCTGCTGATGGCGCCCGAATTCCAGAG ACGATAG
Upstream 100 bases:
>100_bases CGCTGGCATCGCTGGTAGGGGGCTCGGGGGCCGACAACTTCGCCGGCCCCACGACCTCAATTGAACAGGCACGAAACAGC TCGAACGGGCTTCCGGCGCC
Downstream 100 bases:
>100_bases CGCGAGCAACAGGTCCGGCGCCGACATGGAGACCAAGTCATGAGCCTGCTGTGTGAAACTCCCCATCCGTCCCGCCGCGC CGTGCTGATGACCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRGEPKQWRADLAIPAANSPPDPVLVAFNRFGLGARPGDRDKVTHDPRGYLKAELRQPDIALISLDDPAYASLPGSTPAI QASMAANFQRKLDREHMAAAAQPAMASAKSMPTQATPAPIAPAHPLPPPTAPAKPAPPVEAALFRAEAQARFDKAFRAEA GFVERLVYFWSNHFCVSVAKDNIVRASAGAFEREAIRPFVLGRFADMLMAVERHPAMLFYLDNQQSIGPDSRAGKNRRRG LNENLAREILELHTLGVGSGYTQADVTSFARILTGWTMVGREGRLGEPGSSVFNANAHEPGDAVLLGKTYPAAGMGQAEA ALNDIASHPATAQHIATQLARHFIADDPPPAVVARLAKVFAKSDGNLRALAATLIDMPEAWSTPLAKMRSPFDYIAAIRR AAGPGPANDPGQSLNWLNALGEPLWQPPGPNGFSDQADSWASAEGMKIRLDIAWRAARQVKDIGNPNDMLDAVIGPSASP ETRQAVARAESKQQGLALLLMAPEFQRR
Sequences:
>Translated_508_residues MRGEPKQWRADLAIPAANSPPDPVLVAFNRFGLGARPGDRDKVTHDPRGYLKAELRQPDIALISLDDPAYASLPGSTPAI QASMAANFQRKLDREHMAAAAQPAMASAKSMPTQATPAPIAPAHPLPPPTAPAKPAPPVEAALFRAEAQARFDKAFRAEA GFVERLVYFWSNHFCVSVAKDNIVRASAGAFEREAIRPFVLGRFADMLMAVERHPAMLFYLDNQQSIGPDSRAGKNRRRG LNENLAREILELHTLGVGSGYTQADVTSFARILTGWTMVGREGRLGEPGSSVFNANAHEPGDAVLLGKTYPAAGMGQAEA ALNDIASHPATAQHIATQLARHFIADDPPPAVVARLAKVFAKSDGNLRALAATLIDMPEAWSTPLAKMRSPFDYIAAIRR AAGPGPANDPGQSLNWLNALGEPLWQPPGPNGFSDQADSWASAEGMKIRLDIAWRAARQVKDIGNPNDMLDAVIGPSASP ETRQAVARAESKQQGLALLLMAPEFQRR >Mature_508_residues MRGEPKQWRADLAIPAANSPPDPVLVAFNRFGLGARPGDRDKVTHDPRGYLKAELRQPDIALISLDDPAYASLPGSTPAI QASMAANFQRKLDREHMAAAAQPAMASAKSMPTQATPAPIAPAHPLPPPTAPAKPAPPVEAALFRAEAQARFDKAFRAEA GFVERLVYFWSNHFCVSVAKDNIVRASAGAFEREAIRPFVLGRFADMLMAVERHPAMLFYLDNQQSIGPDSRAGKNRRRG LNENLAREILELHTLGVGSGYTQADVTSFARILTGWTMVGREGRLGEPGSSVFNANAHEPGDAVLLGKTYPAAGMGQAEA ALNDIASHPATAQHIATQLARHFIADDPPPAVVARLAKVFAKSDGNLRALAATLIDMPEAWSTPLAKMRSPFDYIAAIRR AAGPGPANDPGQSLNWLNALGEPLWQPPGPNGFSDQADSWASAEGMKIRLDIAWRAARQVKDIGNPNDMLDAVIGPSASP ETRQAVARAESKQQGLALLLMAPEFQRR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54565; Mature: 54565
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGEPKQWRADLAIPAANSPPDPVLVAFNRFGLGARPGDRDKVTHDPRGYLKAELRQPDI CCCCCCCHHCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCE ALISLDDPAYASLPGSTPAIQASMAANFQRKLDREHMAAAAQPAMASAKSMPTQATPAPI EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC APAHPLPPPTAPAKPAPPVEAALFRAEAQARFDKAFRAEAGFVERLVYFWSNHFCVSVAK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC DNIVRASAGAFEREAIRPFVLGRFADMLMAVERHPAMLFYLDNQQSIGPDSRAGKNRRRG CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHCC LNENLAREILELHTLGVGSGYTQADVTSFARILTGWTMVGREGRLGEPGSSVFNANAHEP CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GDAVLLGKTYPAAGMGQAEAALNDIASHPATAQHIATQLARHFIADDPPPAVVARLAKVF CCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AKSDGNLRALAATLIDMPEAWSTPLAKMRSPFDYIAAIRRAAGPGPANDPGQSLNWLNAL HCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GEPLWQPPGPNGFSDQADSWASAEGMKIRLDIAWRAARQVKDIGNPNDMLDAVIGPSASP CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCH ETRQAVARAESKQQGLALLLMAPEFQRR HHHHHHHHHHHHHCCEEEEEECCHHCCC >Mature Secondary Structure MRGEPKQWRADLAIPAANSPPDPVLVAFNRFGLGARPGDRDKVTHDPRGYLKAELRQPDI CCCCCCCHHCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCE ALISLDDPAYASLPGSTPAIQASMAANFQRKLDREHMAAAAQPAMASAKSMPTQATPAPI EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC APAHPLPPPTAPAKPAPPVEAALFRAEAQARFDKAFRAEAGFVERLVYFWSNHFCVSVAK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC DNIVRASAGAFEREAIRPFVLGRFADMLMAVERHPAMLFYLDNQQSIGPDSRAGKNRRRG CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHCC LNENLAREILELHTLGVGSGYTQADVTSFARILTGWTMVGREGRLGEPGSSVFNANAHEP CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GDAVLLGKTYPAAGMGQAEAALNDIASHPATAQHIATQLARHFIADDPPPAVVARLAKVF CCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AKSDGNLRALAATLIDMPEAWSTPLAKMRSPFDYIAAIRRAAGPGPANDPGQSLNWLNAL HCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GEPLWQPPGPNGFSDQADSWASAEGMKIRLDIAWRAARQVKDIGNPNDMLDAVIGPSASP CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCH ETRQAVARAESKQQGLALLLMAPEFQRR HHHHHHHHHHHHHCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA