| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474548
Identifier: 13474548
GI number: 13474548
Start: 4371780
End: 4372235
Strand: Reverse
Name: 13474548
Synonym: mll5454
Alternate gene names: NA
Gene position: 4372235-4371780 (Counterclockwise)
Preceding gene: 13474549
Following gene: 13474547
Centisome position: 62.14
GC content: 69.96
Gene sequence:
>456_bases ATGAGCACAGGCCGCAATCTCCTCATCGCATCGGTGGTGCTGAATGTCTTCCTGGCTGGCGCGCTTGCCGGCGGGGCCGT CTGGATAAAACGCGGCAAGCCGGCCCAGGGCTATTCGCTGGAGGCGGCCGGCGGTCGGCTTCCAGACCAGCAGCGCACGC TGTTCCGCAAGGCGCTGCGCGAAGTCCGCCAAGAGTCGCGCGAAATCATTCGCGACGGCCAGCAGGCCAGGCGCGAGGCA GCGGATTTGCTGCGGCAGCCCGTCCTCGACACGGCGGCCCTGGCCGCCGCCCTGGAACGTGCCCGCAATGCCGACGTCAC CGTGCGCACCCGGCTGGAGCAGCGCATCATCGCGTTCGCGGCGGCAGGCTCCGCCGAGGATCGCAGCCTGCTGGCGGAAG GGCTCTCGAGGCGCGCCGGGCCGCAGCCGTCGACACCGCCAAAAAAATCGCCGTGA
Upstream 100 bases:
>100_bases TGACCGTCGTCACGCCCGACGTTCAGCCCGACCATTATGTGCTAGACGCCAATGCGACGGCGTTCGGCGATGCCGGACCC GACACGATCGAGGAAGACCT
Downstream 100 bases:
>100_bases CGACCGACGGAAAATGCCGACGGCGCCCGTTTAACGAAATGAAGGGCAAGGCCTGCCGGGCTATCTGGCGCCGACAGGTT TTCAACCTCGGACAACTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSTGRNLLIASVVLNVFLAGALAGGAVWIKRGKPAQGYSLEAAGGRLPDQQRTLFRKALREVRQESREIIRDGQQARREA ADLLRQPVLDTAALAAALERARNADVTVRTRLEQRIIAFAAAGSAEDRSLLAEGLSRRAGPQPSTPPKKSP
Sequences:
>Translated_151_residues MSTGRNLLIASVVLNVFLAGALAGGAVWIKRGKPAQGYSLEAAGGRLPDQQRTLFRKALREVRQESREIIRDGQQARREA ADLLRQPVLDTAALAAALERARNADVTVRTRLEQRIIAFAAAGSAEDRSLLAEGLSRRAGPQPSTPPKKSP >Mature_150_residues STGRNLLIASVVLNVFLAGALAGGAVWIKRGKPAQGYSLEAAGGRLPDQQRTLFRKALREVRQESREIIRDGQQARREAA DLLRQPVLDTAALAAALERARNADVTVRTRLEQRIIAFAAAGSAEDRSLLAEGLSRRAGPQPSTPPKKSP
Specific function: Unknown
COG id: COG5612
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16262; Mature: 16131
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGRNLLIASVVLNVFLAGALAGGAVWIKRGKPAQGYSLEAAGGRLPDQQRTLFRKALR CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHH EVRQESREIIRDGQQARREAADLLRQPVLDTAALAAALERARNADVTVRTRLEQRIIAFA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AAGSAEDRSLLAEGLSRRAGPQPSTPPKKSP HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure STGRNLLIASVVLNVFLAGALAGGAVWIKRGKPAQGYSLEAAGGRLPDQQRTLFRKALR CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHH EVRQESREIIRDGQQARREAADLLRQPVLDTAALAAALERARNADVTVRTRLEQRIIAFA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AAGSAEDRSLLAEGLSRRAGPQPSTPPKKSP HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA