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The map label for this gene is tdcF [C]

Identifier: 13474527

GI number: 13474527

Start: 4343704

End: 4344117

Strand: Reverse

Name: tdcF [C]

Synonym: mll5429

Alternate gene names: 13474527

Gene position: 4344117-4343704 (Counterclockwise)

Preceding gene: 13474528

Following gene: 13474525

Centisome position: 61.74

GC content: 63.29

Gene sequence:

>414_bases
ATGCATGAGATTCTGCAGCCGGAAGGCTGGGCCAAACCGGTCGGCTACGCCAATGGCGTAGCGGCGCGTGGACGACTCAT
CTTTGTCGGTGGACAGGTCGGCTGGAACGGGCAGTGCCAGTTCGAAACCGACGACTTTGTCGGCCAGGTGCGGCAGACGC
TGCAAAATATCGTCGCGGTGCTGGCCGAGGCCGGTGCCGAGCCTCGGCACATCACCTCGATGACCTGGTATTTCACCGAC
AAGGCCGAGTATCTCGCCAATCTCAGGGGCATCGGCGAAGCCTATCGCGAGGTGATCGGCCGGCATTTCCCGGCGATGGC
CGCCATGCAGGTGATGGCGCTTGTCGAGGACCGCGCCAAGGTGGAGATCCAGGCCACCGCTGTGATACCCGACGCACTCG
GTCGTCCGGACTAA

Upstream 100 bases:

>100_bases
GTGGTCATCGCGCGGCAAGTGATGGGCGCGGCCTAACGGTGGGAAATTGAAGAGTATTCGATTTTGAGACTTGGTTTTCA
GAAATACCGGGAGGCTTCAA

Downstream 100 bases:

>100_bases
GTCACCCGCAGGCCCGCCTTCCTCAAAATCGGCAGCACGTGGTCGCAGAAATAGGGCAGTTCCTGCGTGTAGTTGACGAA
GGAGAGCGCGATGCCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Pyrimidine Utilization Protein C; Endoribonuclease; Translation Initiation Inhibitor; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAVLAEAGAEPRHITSMTWYFTD
KAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAKVEIQATAVIPDALGRPD

Sequences:

>Translated_137_residues
MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAVLAEAGAEPRHITSMTWYFTD
KAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAKVEIQATAVIPDALGRPD
>Mature_137_residues
MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAVLAEAGAEPRHITSMTWYFTD
KAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAKVEIQATAVIPDALGRPD

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15042; Mature: 15042

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
LAEAGAEPRHITSMTWYFTDKAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAK
HHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCE
VEIQATAVIPDALGRPD
EEEEEEEECCHHCCCCC
>Mature Secondary Structure
MHEILQPEGWAKPVGYANGVAARGRLIFVGGQVGWNGQCQFETDDFVGQVRQTLQNIVAV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
LAEAGAEPRHITSMTWYFTDKAEYLANLRGIGEAYREVIGRHFPAMAAMQVMALVEDRAK
HHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCE
VEIQATAVIPDALGRPD
EEEEEEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA