| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474369
Identifier: 13474369
GI number: 13474369
Start: 4170266
End: 4171672
Strand: Reverse
Name: 13474369
Synonym: mll5242
Alternate gene names: NA
Gene position: 4171672-4170266 (Counterclockwise)
Preceding gene: 13474370
Following gene: 13474368
Centisome position: 59.29
GC content: 64.46
Gene sequence:
>1407_bases GTGCCGGCGCCGTGCGATCGACAGGGGTCGCGGCCACCAGGCTGGAGATTGCATCGCTTGCCTGAAGCAAATCCCGCAGC GCTGTCCGATGACGACCTCCTGGACCGCTACCAGCGCGCCGCCTTCGGCTATTTCCTGGAGAATGTGAACCCCGACAACG GGCTGGTCGCCGATACATCACGGCCGAACTCGCCGGCCAGCATCGCCGTCGTCGGTTTTGCGCTGTCCTGCTATCCGATC GGTGTCGAGCGCGGCTGGATGCCGCGCGCGGCGGCGGTGGAGCTGACGCTTGCGGCGCTGCGTTTCTTCTCGGCCAGCCC CCAAAACGGTGGTGACAACGTCACCGGCCATAAGGGTTTCTACTACCACTTCCTCGACATGCGCACAGGCTTGCGCGTCT GGCGTTGCGAGCTGTCGATGGTGGATACAGCCTTGCTGATGGCCGGCATATTGGTGGCCGGCGCTTATTTCTCCGGCGGG GACGAGGGGGAGGCCGAGATCCGGCAGCTGGGCGAAGCACTCTACCGGCGCGTCGACTGGCGCTGGGCGCAAGGCAGCAG CCCTACCTTGCGGCAGGGCTGGAAGCCGAAGAGCGGTTTCCTCCACTATGGCTGGGAAGGCTACAACGAGGCGACCATCC TCTATGTGCTGTCGATGGCTTCGCCGGACAGCCCGACTTCCGACGATAGTTACGAAGCCTGGACGGCGACCTACCAATGG GAAAACATCTACGGCCATGACGTGCTCTATGGCGGCCCGCTGTTCATGCACCAGTTTTCGCATGCCTGGATCGATTTCGC CGGCATCCGCGACGCTTTCATGCGCGAGAAGAATTCGGACTATTTCGAAAACAGCCGCCGCTCGACCTATCTCCACCGCG ACTATGCCCGCCACAACCCCTATGGCTTCGACGGCTATGGCGAGAACCTTTGGGGCCTCTCGGCGGGAGACGGGCCGGGC GGCTTCCGCGCCAGTGTCGAGCGACGGAGACACCGGTTTTCGGGCTATGCTGCGCGTGGCGCACCGTTCGGGCCGGATGA CGGGACGATCGCGCCATGGTCCTATCCCGCGTCGCTGCCTTTCGCGCCTGACATCTGCCTGGCCGCCATGCGTCATCTCG GCGAGCGCTATCCCCAAGTGATGGACAATTTCCGCCTGCCGAGCGGCTTCAATCCGACCTTGGCCAACCGGCGAAAATTC GGCCGCGACGGCTGGGTGTCGGAAGGCCATTACGGGCTGGACCAGGGCATCGTGGTGATGATGATCGAGAACCACCGCTC GCGCCTGATCTGGGAGCTGATGCGCTCCAATCCGCACATCCGCCGCGGCCTGGGCAAAGCGGGTTTCACCGGCGGCTGGC TGGCTCAGCCGGCAGGCTCCACGTCAGGAGCCTACGATGGCGCGTGA
Upstream 100 bases:
>100_bases ATTGGACAGGCCTATATAGTCGGTGACGGGCGGCGACGAAACAGGGTTTGCGGGAAAGCCATGAAGCGACGAGATAGTTT GGCGATGACCCAAGGCCGTC
Downstream 100 bases:
>100_bases ACAGACAAAGGCGGCCACCTTCCCAGTCGACCGCAATGACGTCGAACTGGTCCGAGGCGCGCATCCGCCGCGCTGGAAGA ACCCTACTCCCGACGGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPAPCDRQGSRPPGWRLHRLPEANPAALSDDDLLDRYQRAAFGYFLENVNPDNGLVADTSRPNSPASIAVVGFALSCYPI GVERGWMPRAAAVELTLAALRFFSASPQNGGDNVTGHKGFYYHFLDMRTGLRVWRCELSMVDTALLMAGILVAGAYFSGG DEGEAEIRQLGEALYRRVDWRWAQGSSPTLRQGWKPKSGFLHYGWEGYNEATILYVLSMASPDSPTSDDSYEAWTATYQW ENIYGHDVLYGGPLFMHQFSHAWIDFAGIRDAFMREKNSDYFENSRRSTYLHRDYARHNPYGFDGYGENLWGLSAGDGPG GFRASVERRRHRFSGYAARGAPFGPDDGTIAPWSYPASLPFAPDICLAAMRHLGERYPQVMDNFRLPSGFNPTLANRRKF GRDGWVSEGHYGLDQGIVVMMIENHRSRLIWELMRSNPHIRRGLGKAGFTGGWLAQPAGSTSGAYDGA
Sequences:
>Translated_468_residues MPAPCDRQGSRPPGWRLHRLPEANPAALSDDDLLDRYQRAAFGYFLENVNPDNGLVADTSRPNSPASIAVVGFALSCYPI GVERGWMPRAAAVELTLAALRFFSASPQNGGDNVTGHKGFYYHFLDMRTGLRVWRCELSMVDTALLMAGILVAGAYFSGG DEGEAEIRQLGEALYRRVDWRWAQGSSPTLRQGWKPKSGFLHYGWEGYNEATILYVLSMASPDSPTSDDSYEAWTATYQW ENIYGHDVLYGGPLFMHQFSHAWIDFAGIRDAFMREKNSDYFENSRRSTYLHRDYARHNPYGFDGYGENLWGLSAGDGPG GFRASVERRRHRFSGYAARGAPFGPDDGTIAPWSYPASLPFAPDICLAAMRHLGERYPQVMDNFRLPSGFNPTLANRRKF GRDGWVSEGHYGLDQGIVVMMIENHRSRLIWELMRSNPHIRRGLGKAGFTGGWLAQPAGSTSGAYDGA >Mature_467_residues PAPCDRQGSRPPGWRLHRLPEANPAALSDDDLLDRYQRAAFGYFLENVNPDNGLVADTSRPNSPASIAVVGFALSCYPIG VERGWMPRAAAVELTLAALRFFSASPQNGGDNVTGHKGFYYHFLDMRTGLRVWRCELSMVDTALLMAGILVAGAYFSGGD EGEAEIRQLGEALYRRVDWRWAQGSSPTLRQGWKPKSGFLHYGWEGYNEATILYVLSMASPDSPTSDDSYEAWTATYQWE NIYGHDVLYGGPLFMHQFSHAWIDFAGIRDAFMREKNSDYFENSRRSTYLHRDYARHNPYGFDGYGENLWGLSAGDGPGG FRASVERRRHRFSGYAARGAPFGPDDGTIAPWSYPASLPFAPDICLAAMRHLGERYPQVMDNFRLPSGFNPTLANRRKFG RDGWVSEGHYGLDQGIVVMMIENHRSRLIWELMRSNPHIRRGLGKAGFTGGWLAQPAGSTSGAYDGA
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52230; Mature: 52099
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPCDRQGSRPPGWRLHRLPEANPAALSDDDLLDRYQRAAFGYFLENVNPDNGLVADTS CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCC RPNSPASIAVVGFALSCYPIGVERGWMPRAAAVELTLAALRFFSASPQNGGDNVTGHKGF CCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE YYHFLDMRTGLRVWRCELSMVDTALLMAGILVAGAYFSGGDEGEAEIRQLGEALYRRVDW EEEEEEHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC RWAQGSSPTLRQGWKPKSGFLHYGWEGYNEATILYVLSMASPDSPTSDDSYEAWTATYQW EECCCCCCHHHCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEE ENIYGHDVLYGGPLFMHQFSHAWIDFAGIRDAFMREKNSDYFENSRRSTYLHRDYARHNP CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCC YGFDGYGENLWGLSAGDGPGGFRASVERRRHRFSGYAARGAPFGPDDGTIAPWSYPASLP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCC FAPDICLAAMRHLGERYPQVMDNFRLPSGFNPTLANRRKFGRDGWVSEGHYGLDQGIVVM CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEE MIENHRSRLIWELMRSNPHIRRGLGKAGFTGGWLAQPAGSTSGAYDGA EECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAPCDRQGSRPPGWRLHRLPEANPAALSDDDLLDRYQRAAFGYFLENVNPDNGLVADTS CCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCC RPNSPASIAVVGFALSCYPIGVERGWMPRAAAVELTLAALRFFSASPQNGGDNVTGHKGF CCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE YYHFLDMRTGLRVWRCELSMVDTALLMAGILVAGAYFSGGDEGEAEIRQLGEALYRRVDW EEEEEEHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC RWAQGSSPTLRQGWKPKSGFLHYGWEGYNEATILYVLSMASPDSPTSDDSYEAWTATYQW EECCCCCCHHHCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEE ENIYGHDVLYGGPLFMHQFSHAWIDFAGIRDAFMREKNSDYFENSRRSTYLHRDYARHNP CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCC YGFDGYGENLWGLSAGDGPGGFRASVERRRHRFSGYAARGAPFGPDDGTIAPWSYPASLP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCC FAPDICLAAMRHLGERYPQVMDNFRLPSGFNPTLANRRKFGRDGWVSEGHYGLDQGIVVM CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEE MIENHRSRLIWELMRSNPHIRRGLGKAGFTGGWLAQPAGSTSGAYDGA EECCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA