| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is merA [H]
Identifier: 13474368
GI number: 13474368
Start: 4168747
End: 4170276
Strand: Reverse
Name: merA [H]
Synonym: mll5241
Alternate gene names: 13474368
Gene position: 4170276-4168747 (Counterclockwise)
Preceding gene: 13474369
Following gene: 13474366
Centisome position: 59.27
GC content: 65.56
Gene sequence:
>1530_bases ATGGCGCGTGAACAGACAAAGGCGGCCACCTTCCCAGTCGACCGCAATGACGTCGAACTGGTCCGAGGCGCGCATCCGCC GCGCTGGAAGAACCCTACTCCCGACGGTCCCTACAATCTCGTCGTCATCGGCGCCGGACCGGCCGGCCTGACCGCGGCAC GCGACGCCGCAAGCCTTGGCGCAAAGGTCGCACTGATCGAGCGCGGGCTGATCGGCGGCGCCTGCGTCAATGTCGGCGGC GTCCCCTCGAAGTCGATCATCCGCACGGCCAGGCTCTATGCCGATATGCGCGATGCCGAGAATTTCGGCGGCGACACGCC GGCGCGTCTTCCCGTGGACTTCGAACGGGCCATGATGCGGATGCGGCAGATCCGGCAGCGGCTCAGCCGCGCCGATTCGG CCGCGGCCATCACAGCCGAAGGCATCGACCTCTATTTCGGTGAAGCGCGCTTTGGCGGACCGGACACGGTTGAAGTCGCC GGCAAGACGCTGCATTTCAAGAAGGCCCTGGTCGCGACCGGCGCGCATCCGAGCGGGCCGGCGATACCGGGACTTGCCGA GGCCGGCTATCTCGACAATGAGAGCATGTTCAACCTCACGCGGCGTCCTGAGCGGCTCCTGGTCATCGGCGGCGGGCCGC TTGGCTGCGAGACGGCGCAGGCCTTCTGTCTTCTCGGCGCGAAGGTCATCCTGGCGCAGAGCGACCCGATGTTCCTGCCC GGCGAGGAACGCGACGCCGCGCAGATCCTTTCGGACACACTGGCGCGCGAGGGGGTGGAGGTGCGCCTGAACACCGAGGT GGTGGCGGTACGCAAGGAAGGCGGCAGGAAGCTCGCCGATCTTTTGCGGGACGGCGACACGACAACGATCTCCGTTGACG AGATCATCACCGGCGTCGGCCGTTCGCCCAATGTCAGGGGTCTCGGACTGGAAGAGGCCGGGGTGGTGTATGACGCCAAC GGCATCAAGGTGGACGATCATTTGAGGACCACCAATCCGCACATCTACGCGGCGGGCGATGTGTGCCTGGAATACAAGTT CACTCATACCGCCGAGGCAGCGGCACGCATTGTCGTGCGCAATGCCCTGTTTCGCGGGCGCGAAAGGCTCAGTGACCTCG TCGTTCCCTGGTGCACCTATACCGATCCGGAGATCGCTCACGTCGGTCTTTATCCGATCGAGGCGCGGCAGAACGGCATT CCGGTCAAGACCTATACGGTGCTGATGCATGATGTCGCCCGCGCCGTGATGGACGGCGAGGAGGAAGGGTTCGTCAAGAT CCATGTCCGGGAGGGATCCGACCGCATCCTGGGGGCGACGGTCGTCGCCAGCCATGCCGGCGAGATGATCAATGCGGTGA CGCTTGCCATCAGGTCGGGCATGGGATTGCACGCCCTGGCCGACGTCATCCATGCCTTCCCGACGCAGGCACAAGGCATC AAGATGGCGGGCGACGCCTACAGGCGAACCCGGTTCACCTCCTTGCGCAGGCGTCTGGCGGCGCGCTGGCTGGCCTGGTC GAGGCGATGA
Upstream 100 bases:
>100_bases CTGATGCGCTCCAATCCGCACATCCGCCGCGGCCTGGGCAAAGCGGGTTTCACCGGCGGCTGGCTGGCTCAGCCGGCAGG CTCCACGTCAGGAGCCTACG
Downstream 100 bases:
>100_bases GCCTGGCCACACGCCGAGGACTCGAGGCGACAGTATTCAAAATATGCAGTGCTTGACGAAAGCCTTGTTCAGCTAAACAA GGTGGCGCTTGCAACCACGG
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MAREQTKAATFPVDRNDVELVRGAHPPRWKNPTPDGPYNLVVIGAGPAGLTAARDAASLGAKVALIERGLIGGACVNVGG VPSKSIIRTARLYADMRDAENFGGDTPARLPVDFERAMMRMRQIRQRLSRADSAAAITAEGIDLYFGEARFGGPDTVEVA GKTLHFKKALVATGAHPSGPAIPGLAEAGYLDNESMFNLTRRPERLLVIGGGPLGCETAQAFCLLGAKVILAQSDPMFLP GEERDAAQILSDTLAREGVEVRLNTEVVAVRKEGGRKLADLLRDGDTTTISVDEIITGVGRSPNVRGLGLEEAGVVYDAN GIKVDDHLRTTNPHIYAAGDVCLEYKFTHTAEAAARIVVRNALFRGRERLSDLVVPWCTYTDPEIAHVGLYPIEARQNGI PVKTYTVLMHDVARAVMDGEEEGFVKIHVREGSDRILGATVVASHAGEMINAVTLAIRSGMGLHALADVIHAFPTQAQGI KMAGDAYRRTRFTSLRRRLAARWLAWSRR
Sequences:
>Translated_509_residues MAREQTKAATFPVDRNDVELVRGAHPPRWKNPTPDGPYNLVVIGAGPAGLTAARDAASLGAKVALIERGLIGGACVNVGG VPSKSIIRTARLYADMRDAENFGGDTPARLPVDFERAMMRMRQIRQRLSRADSAAAITAEGIDLYFGEARFGGPDTVEVA GKTLHFKKALVATGAHPSGPAIPGLAEAGYLDNESMFNLTRRPERLLVIGGGPLGCETAQAFCLLGAKVILAQSDPMFLP GEERDAAQILSDTLAREGVEVRLNTEVVAVRKEGGRKLADLLRDGDTTTISVDEIITGVGRSPNVRGLGLEEAGVVYDAN GIKVDDHLRTTNPHIYAAGDVCLEYKFTHTAEAAARIVVRNALFRGRERLSDLVVPWCTYTDPEIAHVGLYPIEARQNGI PVKTYTVLMHDVARAVMDGEEEGFVKIHVREGSDRILGATVVASHAGEMINAVTLAIRSGMGLHALADVIHAFPTQAQGI KMAGDAYRRTRFTSLRRRLAARWLAWSRR >Mature_508_residues AREQTKAATFPVDRNDVELVRGAHPPRWKNPTPDGPYNLVVIGAGPAGLTAARDAASLGAKVALIERGLIGGACVNVGGV PSKSIIRTARLYADMRDAENFGGDTPARLPVDFERAMMRMRQIRQRLSRADSAAAITAEGIDLYFGEARFGGPDTVEVAG KTLHFKKALVATGAHPSGPAIPGLAEAGYLDNESMFNLTRRPERLLVIGGGPLGCETAQAFCLLGAKVILAQSDPMFLPG EERDAAQILSDTLAREGVEVRLNTEVVAVRKEGGRKLADLLRDGDTTTISVDEIITGVGRSPNVRGLGLEEAGVVYDANG IKVDDHLRTTNPHIYAAGDVCLEYKFTHTAEAAARIVVRNALFRGRERLSDLVVPWCTYTDPEIAHVGLYPIEARQNGIP VKTYTVLMHDVARAVMDGEEEGFVKIHVREGSDRILGATVVASHAGEMINAVTLAIRSGMGLHALADVIHAFPTQAQGIK MAGDAYRRTRFTSLRRRLAARWLAWSRR
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=466, Percent_Identity=29.1845493562232, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI50301238, Length=463, Percent_Identity=29.3736501079914, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI22035672, Length=456, Percent_Identity=27.8508771929825, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI291045266, Length=460, Percent_Identity=25.2173913043478, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI33519430, Length=455, Percent_Identity=23.956043956044, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI33519428, Length=455, Percent_Identity=23.956043956044, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI33519426, Length=455, Percent_Identity=23.956043956044, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI148277065, Length=463, Percent_Identity=23.9740820734341, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI148277071, Length=455, Percent_Identity=23.956043956044, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI291045268, Length=453, Percent_Identity=24.0618101545254, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1786307, Length=464, Percent_Identity=29.7413793103448, Blast_Score=191, Evalue=8e-50, Organism=Escherichia coli, GI87081717, Length=453, Percent_Identity=28.9183222958057, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1789915, Length=429, Percent_Identity=30.0699300699301, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI87082354, Length=458, Percent_Identity=25.5458515283843, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1789065, Length=217, Percent_Identity=27.6497695852535, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI32565766, Length=466, Percent_Identity=29.3991416309013, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17557007, Length=468, Percent_Identity=26.9230769230769, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71983419, Length=441, Percent_Identity=28.7981859410431, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71983429, Length=441, Percent_Identity=28.7981859410431, Blast_Score=116, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321091, Length=487, Percent_Identity=28.952772073922, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6325166, Length=460, Percent_Identity=27.6086956521739, Blast_Score=141, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6325240, Length=475, Percent_Identity=25.2631578947368, Blast_Score=116, Evalue=9e-27, Organism=Drosophila melanogaster, GI21358499, Length=468, Percent_Identity=29.9145299145299, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24640549, Length=471, Percent_Identity=24.416135881104, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI24640551, Length=474, Percent_Identity=24.6835443037975, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24640553, Length=471, Percent_Identity=24.416135881104, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI17737741, Length=486, Percent_Identity=26.5432098765432, Blast_Score=118, Evalue=8e-27,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 54892; Mature: 54761
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREQTKAATFPVDRNDVELVRGAHPPRWKNPTPDGPYNLVVIGAGPAGLTAARDAASLG CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC AKVALIERGLIGGACVNVGGVPSKSIIRTARLYADMRDAENFGGDTPARLPVDFERAMMR CEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRQIRQRLSRADSAAAITAEGIDLYFGEARFGGPDTVEVAGKTLHFKKALVATGAHPSGP HHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCEEECCCCEEEHHHHHHCCCCCCCCC AIPGLAEAGYLDNESMFNLTRRPERLLVIGGGPLGCETAQAFCLLGAKVILAQSDPMFLP CCCCCHHCCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCC GEERDAAQILSDTLAREGVEVRLNTEVVAVRKEGGRKLADLLRDGDTTTISVDEIITGVG CCCCHHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCEEEHHHHHHCCC RSPNVRGLGLEEAGVVYDANGIKVDDHLRTTNPHIYAAGDVCLEYKFTHTAEAAARIVVR CCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHH NALFRGRERLSDLVVPWCTYTDPEIAHVGLYPIEARQNGIPVKTYTVLMHDVARAVMDGE HHHHHHHHHHHHHEECEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC EEGFVKIHVREGSDRILGATVVASHAGEMINAVTLAIRSGMGLHALADVIHAFPTQAQGI CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCE KMAGDAYRRTRFTSLRRRLAARWLAWSRR EECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AREQTKAATFPVDRNDVELVRGAHPPRWKNPTPDGPYNLVVIGAGPAGLTAARDAASLG CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC AKVALIERGLIGGACVNVGGVPSKSIIRTARLYADMRDAENFGGDTPARLPVDFERAMMR CEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRQIRQRLSRADSAAAITAEGIDLYFGEARFGGPDTVEVAGKTLHFKKALVATGAHPSGP HHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCEEECCCCEEEHHHHHHCCCCCCCCC AIPGLAEAGYLDNESMFNLTRRPERLLVIGGGPLGCETAQAFCLLGAKVILAQSDPMFLP CCCCCHHCCCCCCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCC GEERDAAQILSDTLAREGVEVRLNTEVVAVRKEGGRKLADLLRDGDTTTISVDEIITGVG CCCCHHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCEEEHHHHHHCCC RSPNVRGLGLEEAGVVYDANGIKVDDHLRTTNPHIYAAGDVCLEYKFTHTAEAAARIVVR CCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHH NALFRGRERLSDLVVPWCTYTDPEIAHVGLYPIEARQNGIPVKTYTVLMHDVARAVMDGE HHHHHHHHHHHHHEECEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC EEGFVKIHVREGSDRILGATVVASHAGEMINAVTLAIRSGMGLHALADVIHAFPTQAQGI CCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCE KMAGDAYRRTRFTSLRRRLAARWLAWSRR EECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]