| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is epr [H]
Identifier: 13474266
GI number: 13474266
Start: 4054177
End: 4055349
Strand: Reverse
Name: epr [H]
Synonym: mll5116
Alternate gene names: 13474266
Gene position: 4055349-4054177 (Counterclockwise)
Preceding gene: 13474267
Following gene: 13474264
Centisome position: 57.64
GC content: 68.88
Gene sequence:
>1173_bases GTGCCGACGCCCCGACCAGAACCAGCCGCGCCGCCCGGCAACAACCAGGCCGGCCCGCCGGCCGGCGGGCCGATTATCTC GCCAACCGATCTCATCGCCATTCAGCCGCCGCGCGCCGTGGCCGGCGACTTCGTGCCCGACGAGGTGCTGGTGACGGTCG ACGGCGATGCCGGCGCCGTGCAGCAGATCGCCGCCTCCTTCGGCCTCGAAGTGCGCTCGCAGCGCCAGTCACGCCTGCTC GGCACGACATTGGTGCGCTTCGGCATTCCCGACGGCCGCCCCGTCGGCGTCGTGCTGGCGCAGCTTGCCGCCGACGGCCG CACGCAGCGGCGCGAGCCCAACCACATCTATTCGCTGCAGCAGGCCGCCGGCATCGTCAACTATGCTTTCGATCGCATCG CGCTCGATGCCAAACAGGCGAGCGGCGAAAACATCCGCGTCGCCGTCATCGATACCGGTATAGACGACACCAATCCGGCA TTGGCCGGCGTCATCGCCGCGCAGTTCGACGCCATGCCCGGCGTGCCTGTCGAAAAGCGCGACCATGGCACGTCGATCGA CGGGCTGATCGCCGGCGTCGGCGCGCTGGAAGGCATGGCGCCGGGCGCCAGGATCTACCACGCCCGCGCCTTCGAGGGCG GCAAGTCGACCATGGACGTCATCCTGTCGGCGCTCGACTGGGCGGCGGAACAGAATGTCAGCATCATCAATATGAGCTTC GTCGGGCCGAAGAACGACCTGCTCGGCGCCGCCTGCCGCAATGCCCGCGCGCTCGGCATGGTACTGGTCGCCGCCGCCGG CAACAACGGGCCGAAGGCGCCCTATGGCTACCCCGCGGCCTTCGACGGCGTCATCGCGGTGACCGCCACCGACGCCAAGG ACGCTCTGATGCCGCAGGCCAATCGCGGCGCCTATGTCTTCATTTCCGCGCCCGGCGTCGAGATGGTGGCGCCAAGCGGC GCCGGCTCGGATGTCGTTACCGGCACCTCGTTCGCCGCGGCGATCGTCAGCGGTGCCATCGCCAATCTCCTCCATGCTTC GCCCGGGCGTACCGCCGACGACATCGAGAAGGCCTTGGCTGCCACCGCCAAGGATCTCGGCCCGAAGGGGCGCGACAATG ATTTCGGCTATGGGCTGCTGGACATCAAGGCGGCCGAGGCAGCGAAAGAGTAG
Upstream 100 bases:
>100_bases CGACAATGCCGGCAATGCGGGGACTGCCCAGGCAGGCGCCGTCTTTCTTCCCGCCCTGATCGTCGACCTGTTTCCCAATC CGGTCGCGCCTCCGGCACCG
Downstream 100 bases:
>100_bases GTTTTTCCCTGAGCTTCGGGGCTATGCCGCCGGGAGCTGCCGGGTTCGGCCGATCTGCAGAAGCAACGCGGATGCCAGAC AAAGCCCAACGACCGCCAGC
Product: extracellular protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MPTPRPEPAAPPGNNQAGPPAGGPIISPTDLIAIQPPRAVAGDFVPDEVLVTVDGDAGAVQQIAASFGLEVRSQRQSRLL GTTLVRFGIPDGRPVGVVLAQLAADGRTQRREPNHIYSLQQAAGIVNYAFDRIALDAKQASGENIRVAVIDTGIDDTNPA LAGVIAAQFDAMPGVPVEKRDHGTSIDGLIAGVGALEGMAPGARIYHARAFEGGKSTMDVILSALDWAAEQNVSIINMSF VGPKNDLLGAACRNARALGMVLVAAAGNNGPKAPYGYPAAFDGVIAVTATDAKDALMPQANRGAYVFISAPGVEMVAPSG AGSDVVTGTSFAAAIVSGAIANLLHASPGRTADDIEKALAATAKDLGPKGRDNDFGYGLLDIKAAEAAKE
Sequences:
>Translated_390_residues MPTPRPEPAAPPGNNQAGPPAGGPIISPTDLIAIQPPRAVAGDFVPDEVLVTVDGDAGAVQQIAASFGLEVRSQRQSRLL GTTLVRFGIPDGRPVGVVLAQLAADGRTQRREPNHIYSLQQAAGIVNYAFDRIALDAKQASGENIRVAVIDTGIDDTNPA LAGVIAAQFDAMPGVPVEKRDHGTSIDGLIAGVGALEGMAPGARIYHARAFEGGKSTMDVILSALDWAAEQNVSIINMSF VGPKNDLLGAACRNARALGMVLVAAAGNNGPKAPYGYPAAFDGVIAVTATDAKDALMPQANRGAYVFISAPGVEMVAPSG AGSDVVTGTSFAAAIVSGAIANLLHASPGRTADDIEKALAATAKDLGPKGRDNDFGYGLLDIKAAEAAKE >Mature_389_residues PTPRPEPAAPPGNNQAGPPAGGPIISPTDLIAIQPPRAVAGDFVPDEVLVTVDGDAGAVQQIAASFGLEVRSQRQSRLLG TTLVRFGIPDGRPVGVVLAQLAADGRTQRREPNHIYSLQQAAGIVNYAFDRIALDAKQASGENIRVAVIDTGIDDTNPAL AGVIAAQFDAMPGVPVEKRDHGTSIDGLIAGVGALEGMAPGARIYHARAFEGGKSTMDVILSALDWAAEQNVSIINMSFV GPKNDLLGAACRNARALGMVLVAAAGNNGPKAPYGYPAAFDGVIAVTATDAKDALMPQANRGAYVFISAPGVEMVAPSGA GSDVVTGTSFAAAIVSGAIANLLHASPGRTADDIEKALAATAKDLGPKGRDNDFGYGLLDIKAAEAAKE
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=269, Percent_Identity=27.8810408921933, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 39780; Mature: 39649
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPRPEPAAPPGNNQAGPPAGGPIISPTDLIAIQPPRAVAGDFVPDEVLVTVDGDAGAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCEEEEEECCCCHHH QQIAASFGLEVRSQRQSRLLGTTLVRFGIPDGRPVGVVLAQLAADGRTQRREPNHIYSLQ HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH QAAGIVNYAFDRIALDAKQASGENIRVAVIDTGIDDTNPALAGVIAAQFDAMPGVPVEKR HHHHHHHHHHHHHEEEHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC DHGTSIDGLIAGVGALEGMAPGARIYHARAFEGGKSTMDVILSALDWAAEQNVSIINMSF CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE VGPKNDLLGAACRNARALGMVLVAAAGNNGPKAPYGYPAAFDGVIAVTATDAKDALMPQA CCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCC NRGAYVFISAPGVEMVAPSGAGSDVVTGTSFAAAIVSGAIANLLHASPGRTADDIEKALA CCCEEEEEECCCCEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATAKDLGPKGRDNDFGYGLLDIKAAEAAKE HHHHHCCCCCCCCCCCCEEEEEEHHHHCCC >Mature Secondary Structure PTPRPEPAAPPGNNQAGPPAGGPIISPTDLIAIQPPRAVAGDFVPDEVLVTVDGDAGAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCEEEEEECCCCHHH QQIAASFGLEVRSQRQSRLLGTTLVRFGIPDGRPVGVVLAQLAADGRTQRREPNHIYSLQ HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH QAAGIVNYAFDRIALDAKQASGENIRVAVIDTGIDDTNPALAGVIAAQFDAMPGVPVEKR HHHHHHHHHHHHHEEEHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCC DHGTSIDGLIAGVGALEGMAPGARIYHARAFEGGKSTMDVILSALDWAAEQNVSIINMSF CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEE VGPKNDLLGAACRNARALGMVLVAAAGNNGPKAPYGYPAAFDGVIAVTATDAKDALMPQA CCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCC NRGAYVFISAPGVEMVAPSGAGSDVVTGTSFAAAIVSGAIANLLHASPGRTADDIEKALA CCCEEEEEECCCCEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ATAKDLGPKGRDNDFGYGLLDIKAAEAAKE HHHHHCCCCCCCCCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2116590; 3142851; 7934828; 9384377 [H]