| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474267
Identifier: 13474267
GI number: 13474267
Start: 4055615
End: 4056289
Strand: Reverse
Name: 13474267
Synonym: mll5117
Alternate gene names: NA
Gene position: 4056289-4055615 (Counterclockwise)
Preceding gene: 13474268
Following gene: 13474266
Centisome position: 57.65
GC content: 66.81
Gene sequence:
>675_bases GTGGCCATGAGCGCCGCTGAAAAAATGTCGCGCCGCGACGAAATGGAAACGCTGCTGCCGTTCTACCTGAACGGCTCGCT GGAAGGCTCCGACCTCGAAGCCGTCGAGGAATGGCTGGCGACCGATCCGGCGGCGATGGCTGCCCTTGGCGAGGCTGAAG CCGAGTTCTCCGGCACATCGGCCGCCAATGAGGCCATCCGCCCGCCCGCCGATGCGCTCAGCCGCTTCGCCAAAGCGCTC GACGCCGAGGCCGGACCCGCACGCAAGCCCGCCGGCTCGTCCTGGCTGGCGCAGGCCTGGGGCCGCTTCATGGCGGTGCC CGTCGGCGTCGCCTGGGCGGCGGCGGCGGTCCTGCTGGCGCTGATCGCGGTGCAGTCCCTGGTGCAGCCCGGCGGCAAGG GCAAGGATTTCGAAATTGCCGGCGCGCAAGACGATTTGGCCAAAATGCCGTTCGCCCTGGTCAAGTTCAAGCCGGATGCG AAGATGTCCGACATTTCGGCATTCCTCGGCAGCAACGGTTTGAAGGTCATCGGTGGACCGACCGCCGACGGCGTGTTCCA GATCGGCATCCCCGCCGCCAACGCGACCGACTATGCCAAGCAGCTCAGCCTTATTGCCGCCCAGCCGTTCGCGGACACTG TGATCGAGGGAAGGAAACCGGTTGATGGCGGCTGA
Upstream 100 bases:
>100_bases GCGAGGTTCTCGCCATACCGGTCGCGACGGTCAAGACCCGGATGTTCTACGCCCGCAAGAAACTCGGCGAGTCCCTCAAG GCCGCCGGTTACGACAGGGG
Downstream 100 bases:
>100_bases GGCGGCCCTTCGATTTGCGGCAATCCTGGCGGCGGCGATGACAATCGCCGCCGTGCCTGCGTCGGCACAGACCGACACCG CCAAGAGCGACCAGACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAMSAAEKMSRRDEMETLLPFYLNGSLEGSDLEAVEEWLATDPAAMAALGEAEAEFSGTSAANEAIRPPADALSRFAKAL DAEAGPARKPAGSSWLAQAWGRFMAVPVGVAWAAAAVLLALIAVQSLVQPGGKGKDFEIAGAQDDLAKMPFALVKFKPDA KMSDISAFLGSNGLKVIGGPTADGVFQIGIPAANATDYAKQLSLIAAQPFADTVIEGRKPVDGG
Sequences:
>Translated_224_residues MAMSAAEKMSRRDEMETLLPFYLNGSLEGSDLEAVEEWLATDPAAMAALGEAEAEFSGTSAANEAIRPPADALSRFAKAL DAEAGPARKPAGSSWLAQAWGRFMAVPVGVAWAAAAVLLALIAVQSLVQPGGKGKDFEIAGAQDDLAKMPFALVKFKPDA KMSDISAFLGSNGLKVIGGPTADGVFQIGIPAANATDYAKQLSLIAAQPFADTVIEGRKPVDGG >Mature_223_residues AMSAAEKMSRRDEMETLLPFYLNGSLEGSDLEAVEEWLATDPAAMAALGEAEAEFSGTSAANEAIRPPADALSRFAKALD AEAGPARKPAGSSWLAQAWGRFMAVPVGVAWAAAAVLLALIAVQSLVQPGGKGKDFEIAGAQDDLAKMPFALVKFKPDAK MSDISAFLGSNGLKVIGGPTADGVFQIGIPAANATDYAKQLSLIAAQPFADTVIEGRKPVDGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23139; Mature: 23007
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSAAEKMSRRDEMETLLPFYLNGSLEGSDLEAVEEWLATDPAAMAALGEAEAEFSGTS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH AANEAIRPPADALSRFAKALDAEAGPARKPAGSSWLAQAWGRFMAVPVGVAWAAAAVLLA HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVQSLVQPGGKGKDFEIAGAQDDLAKMPFALVKFKPDAKMSDISAFLGSNGLKVIGGP HHHHHHHHCCCCCCCCEEEECCCHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCEEECCC TADGVFQIGIPAANATDYAKQLSLIAAQPFADTVIEGRKPVDGG CCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC >Mature Secondary Structure AMSAAEKMSRRDEMETLLPFYLNGSLEGSDLEAVEEWLATDPAAMAALGEAEAEFSGTS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH AANEAIRPPADALSRFAKALDAEAGPARKPAGSSWLAQAWGRFMAVPVGVAWAAAAVLLA HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAVQSLVQPGGKGKDFEIAGAQDDLAKMPFALVKFKPDAKMSDISAFLGSNGLKVIGGP HHHHHHHHCCCCCCCCEEEECCCHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCEEECCC TADGVFQIGIPAANATDYAKQLSLIAAQPFADTVIEGRKPVDGG CCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA