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The map label for this gene is stbB [H]

Identifier: 13474235

GI number: 13474235

Start: 4019722

End: 4020135

Strand: Reverse

Name: stbB [H]

Synonym: mll5078

Alternate gene names: 13474235

Gene position: 4020135-4019722 (Counterclockwise)

Preceding gene: 13474236

Following gene: 13474228

Centisome position: 57.14

GC content: 58.7

Gene sequence:

>414_bases
TTGATTTTCGTCGATACCAACGTGATTTCGGAGTCTCTGAAGAAGACCCCGGATCCAGCCGTGCTGGCGTGGCTTGTGCG
CAATGACGCCGAACTGGCGCTTCCCACGGTGACGATTGCTGAAATCGCCTTCGGTATTCAAAAGATACGACCTGACGAGC
GTGCGGATCGGCTGGAACAGGGACTTTCCCGATGGCGGCATCGATTTGCTGACCGGATTTTTGGACTGACGGAAGAGGCT
GCCTTGGCTTACGGCGCGATCATGGGGGCCGCGACACGCCAAGGTCCCGGCATGTCGGCTCCCGATGGCATGATCGCGGC
GATAGCGCGCGTGAATGGAGGCCGGCTGGCAACCCGAAATCTCAACGACTTCGGCACCACCAGCCTGGACCTGATCTCAC
CATGGAATTTCTGA

Upstream 100 bases:

>100_bases
CCTCCACCTTCTATGCCAGCCTGACCGCAAGCAGTGGCGTCGACATCGATCTGGAGAAAGTTATTCGCGAGGGTCGCGAG
CTTCATTCAGGAATTGAGCA

Downstream 100 bases:

>100_bases
AGCATGTCTAGTCACCAGTCGGCGATGCGGTCGCCGCCGATGAACTGCGCGCTTTTGGCGGTGTATTCGAACAGCTCGAT
CTTCACGCCGTTGGGATCGC

Product: plasmid stabilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MIFVDTNVISESLKKTPDPAVLAWLVRNDAELALPTVTIAEIAFGIQKIRPDERADRLEQGLSRWRHRFADRIFGLTEEA
ALAYGAIMGAATRQGPGMSAPDGMIAAIARVNGGRLATRNLNDFGTTSLDLISPWNF

Sequences:

>Translated_137_residues
MIFVDTNVISESLKKTPDPAVLAWLVRNDAELALPTVTIAEIAFGIQKIRPDERADRLEQGLSRWRHRFADRIFGLTEEA
ALAYGAIMGAATRQGPGMSAPDGMIAAIARVNGGRLATRNLNDFGTTSLDLISPWNF
>Mature_137_residues
MIFVDTNVISESLKKTPDPAVLAWLVRNDAELALPTVTIAEIAFGIQKIRPDERADRLEQGLSRWRHRFADRIFGLTEEA
ALAYGAIMGAATRQGPGMSAPDGMIAAIARVNGGRLATRNLNDFGTTSLDLISPWNF

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14953; Mature: 14953

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVDTNVISESLKKTPDPAVLAWLVRNDAELALPTVTIAEIAFGIQKIRPDERADRLEQ
CEEECHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
GLSRWRHRFADRIFGLTEEAALAYGAIMGAATRQGPGMSAPDGMIAAIARVNGGRLATRN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEECC
LNDFGTTSLDLISPWNF
CCCCCCCCEECCCCCCC
>Mature Secondary Structure
MIFVDTNVISESLKKTPDPAVLAWLVRNDAELALPTVTIAEIAFGIQKIRPDERADRLEQ
CEEECHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
GLSRWRHRFADRIFGLTEEAALAYGAIMGAATRQGPGMSAPDGMIAAIARVNGGRLATRN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEECC
LNDFGTTSLDLISPWNF
CCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]