Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474228

Identifier: 13474228

GI number: 13474228

Start: 4013597

End: 4013857

Strand: Reverse

Name: 13474228

Synonym: msl5069

Alternate gene names: NA

Gene position: 4013857-4013597 (Counterclockwise)

Preceding gene: 13474235

Following gene: 13474225

Centisome position: 57.05

GC content: 60.15

Gene sequence:

>261_bases
ATGACGGGTTTAATTGGCAGCATGCAGGGCGGGAGAACGATCATGGCCGACAGAACGGTTGCGGAACTGAAGCAGAAGAT
CGCGCAGGCGCGCGAAGTCATCGCCCATCTGATGGACAAGGCCGCCTTCAACGGCGCCGAGGCGCATCGGGCGCTCGACT
ATTTCGGCAGCGATGAATTTGACCGGAATTTCCTGCCCTGGCCGCATCATGGCGATGAAGGGCTGCGCCCCGAGGAACTC
AACGCCGCGAATGACGATTGA

Upstream 100 bases:

>100_bases
TTTGATGTCGAGCGCCATGGCGCGGGAATTGGCATGAAATCGAGACAGAGTCGAGAAAAAGCATACTGTTTGCCGGCAAC
GCCAAAGGCGCTACCTATTG

Downstream 100 bases:

>100_bases
CTACTCGAACATGATCGCCTGCAGCGCGCCGCCGTTGCGCTTCAGCCAGTCCTTGCAGCGGTCGGTGTCGGGGCAGAGTT
TTTCGCACAATTTCCAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTGLIGSMQGGRTIMADRTVAELKQKIAQAREVIAHLMDKAAFNGAEAHRALDYFGSDEFDRNFLPWPHHGDEGLRPEEL
NAANDD

Sequences:

>Translated_86_residues
MTGLIGSMQGGRTIMADRTVAELKQKIAQAREVIAHLMDKAAFNGAEAHRALDYFGSDEFDRNFLPWPHHGDEGLRPEEL
NAANDD
>Mature_85_residues
TGLIGSMQGGRTIMADRTVAELKQKIAQAREVIAHLMDKAAFNGAEAHRALDYFGSDEFDRNFLPWPHHGDEGLRPEELN
AANDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9538; Mature: 9407

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLIGSMQGGRTIMADRTVAELKQKIAQAREVIAHLMDKAAFNGAEAHRALDYFGSDEF
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
DRNFLPWPHHGDEGLRPEELNAANDD
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGLIGSMQGGRTIMADRTVAELKQKIAQAREVIAHLMDKAAFNGAEAHRALDYFGSDEF
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
DRNFLPWPHHGDEGLRPEELNAANDD
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA