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The map label for this gene is ydaL [C]

Identifier: 13473822

GI number: 13473822

Start: 3615653

End: 3616183

Strand: Direct

Name: ydaL [C]

Synonym: mlr4547

Alternate gene names: 13473822

Gene position: 3615653-3616183 (Clockwise)

Preceding gene: 13473821

Following gene: 13473823

Centisome position: 51.39

GC content: 70.43

Gene sequence:

>531_bases
ATGAGCAAGCGTCCGGACCGGCTGAGCGAAGACGACCGGGTGCTGTGGAACCTGGTGGCGCGCACGGCCAAGCCGCTCAA
GGGCAGGGCCTCGGTCGACATTCCCGAAATGGCCATCGAGGCCAAGCCGACGGCGCCGCAACCGGCCCAGCCCGCCGCCA
ATGCGCCGGGAGCGGCAAAGCCGAAGGTGCAGCATGTCACGCACCGGCTCGACGAGCCGACGCTGGACAAACTGTCGAAG
GGCCGGCTGCCGATCGAAGGCCGCGTCGACCTGCACGGCATGACGCAGGACGAGGCCTATTCACTGCTGTTCTCGTTCCT
GCACCGGGCGCATGCCGGCGGCGTCCGCTATGTGCTTGTCATCACCGGCAAGGGGTCGTCCTCCGGCGGCGACGGCGTGC
TGCGGCGCGCCGTGCCCGCCTGGCTGTCGACGCCGGCCTTCCGGCCGCTGGTCTCCAGCCACGACCATGCCGCCCGCAAC
CATGGCGGCGCGGGCGCGCTCTATATCAGGCTGCGGCGGGCACGCTCATGA

Upstream 100 bases:

>100_bases
TCGCCGGTTCGGGCGATGCCGCCGGCGAGATCGCCGGCGTCGTGCGCAACGCCGCCGACTTCTATGCGCTGGTGCCGCGC
GCGCTGGCCAGGGGCGCCAA

Downstream 100 bases:

>100_bases
GGATCGGAGGCGCATGACGCCGTTCGGTGAGAGGCTGCGGGCGCTGCGGCACGAGCGCGGCGTCAGCCAGAAGGACATGG
CGGCGGCGATCGGTGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Smr Domain-Containing Protein; Smr Family Protein; DNA Repair Protein Smr/MutS Family; Smr Protein; SMR/MUTS Family Protein; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Protein/Muts2-Like; DNA Repair Protein; Smr Protein/MutS2 Domain Protein; Smr Protein/MutS2 C-Terminal; Smr Domain Family Protein; Smr Protein/MutS2-Like

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSKRPDRLSEDDRVLWNLVARTAKPLKGRASVDIPEMAIEAKPTAPQPAQPAANAPGAAKPKVQHVTHRLDEPTLDKLSK
GRLPIEGRVDLHGMTQDEAYSLLFSFLHRAHAGGVRYVLVITGKGSSSGGDGVLRRAVPAWLSTPAFRPLVSSHDHAARN
HGGAGALYIRLRRARS

Sequences:

>Translated_176_residues
MSKRPDRLSEDDRVLWNLVARTAKPLKGRASVDIPEMAIEAKPTAPQPAQPAANAPGAAKPKVQHVTHRLDEPTLDKLSK
GRLPIEGRVDLHGMTQDEAYSLLFSFLHRAHAGGVRYVLVITGKGSSSGGDGVLRRAVPAWLSTPAFRPLVSSHDHAARN
HGGAGALYIRLRRARS
>Mature_175_residues
SKRPDRLSEDDRVLWNLVARTAKPLKGRASVDIPEMAIEAKPTAPQPAQPAANAPGAAKPKVQHVTHRLDEPTLDKLSKG
RLPIEGRVDLHGMTQDEAYSLLFSFLHRAHAGGVRYVLVITGKGSSSGGDGVLRRAVPAWLSTPAFRPLVSSHDHAARNH
GGAGALYIRLRRARS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19040; Mature: 18909

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRPDRLSEDDRVLWNLVARTAKPLKGRASVDIPEMAIEAKPTAPQPAQPAANAPGAAK
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCC
PKVQHVTHRLDEPTLDKLSKGRLPIEGRVDLHGMTQDEAYSLLFSFLHRAHAGGVRYVLV
CHHHHHHHHCCCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ITGKGSSSGGDGVLRRAVPAWLSTPAFRPLVSSHDHAARNHGGAGALYIRLRRARS
EECCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SKRPDRLSEDDRVLWNLVARTAKPLKGRASVDIPEMAIEAKPTAPQPAQPAANAPGAAK
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCC
PKVQHVTHRLDEPTLDKLSKGRLPIEGRVDLHGMTQDEAYSLLFSFLHRAHAGGVRYVLV
CHHHHHHHHCCCCCHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ITGKGSSSGGDGVLRRAVPAWLSTPAFRPLVSSHDHAARNHGGAGALYIRLRRARS
EECCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA